Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq780 84.2 5e-11 >seq780 Length=34333 Score = 84.2 bits (92), Expect = 5e-11 Identities = 118/163 (72%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 243592 CAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTAC 243651 ||||| ||||| ||||| ||||||||| || | |||| || || | || || |||||| Sbjct 30787 CAGTATATCGAGTTCGTTGCCGACCGCCTTCTAGTCGCCCTGGGCAACGAAAAGGTGTAC 30846 Query 243652 AACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTC 243711 | || ||||||||||| || ||||| ||| ||||| || || || ||||| Sbjct 30847 AGGTCGTCGAACCCCTTTGATTTCATGGAAAACATATCGCTAGGGGGCAAGACCAACTTT 30906 Query 243712 TTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753 || ||||| || ||| |||| || || | | || ||||| ||| Sbjct 30907 TTTGAAAAACGGGTCGGTGACTACCAGAAGGCC-GGTGTCATG 30948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102863311702350