Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq677 192 7e-44 seq686 87.8 2e-12 >seq677 Length=7370 Score = 192 bits (212), Expect = 7e-44 Identities = 661/1019 (65%), Gaps = 24/1019 (2%) Strand=Plus/Plus Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 ||||| ||||| || ||||| | | || || |||| |||||| ||||| |||||||| Sbjct 4858 AACTCGCCCGCCAGCACGCGTCGCTGGTAAATGTTGGACGTGTAAGGCTCGAAGCACTCG 4917 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 || || || | ||| || | ||| ||| || |||||||| || | || || ||||| Sbjct 4918 TTATTGCCGAGGATCTGCGACGTGCTGGCCGTCGGCATGGGGGCTACCAGCAGACTGTTG 4977 Query 114035 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT- 114093 || | || | ||| | || | ||| || | ||||| || || |||| || Sbjct 4978 CGTATGCCATGCTCCTTGATCTGCTCCCGTAGCGTTTCCCACTCCCAG---AGCTCTGAA 5034 Query 114094 --CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAAT 114151 || | ||| |||||| ||||||||||| | || | || || |||||||||| ||| Sbjct 5035 GGCTTCACCTTCCACATGTCAAACTGGAGCACGCCCTCCGACGCCGGCGATCCCTTAAAC 5094 Query 114152 GTCTCGTATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGC-CTCGAGGGCTGCGTG 114207 | | ||| || || || || |||| || ||| || ||| ||| | ||||| Sbjct 5095 GACGAGTAGGGCCCTTCGCTCTTGGCCAGCTCCATCGAG---GCACTCAAGG-CGGCGTG 5150 Query 114208 ATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAG 114267 || || || || || || | || | || |||||| || ||||||| | Sbjct 5151 GTAGATGGTTTCGAAGATTTGCTGGTTTAGCTCCCGGGCCTCCGGAGACTCAAACGGCAT 5210 Query 114268 TCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 114327 ||| | ||| |||| || || || |||||||| | ||||| || || || | Sbjct 5211 GCGGAGAGCCAGAAAAGCATCGGCCAGGCCCTGGACACCCACACCAATCGGCCGGTGCCG 5270 Query 114328 CATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAG 114387 ||| || || || || || || || ||| || ||||| | |||||| || Sbjct 5271 CATGTTGCTGTTGCGGGCCTCTTCAACTGGGTAATGGTTGACGTCGATGATCCTATTGAG 5330 Query 114388 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 114447 || | |||||||| || | || || ||||| | | | || | | || || Sbjct 5331 GTTACGGACGACAACCTGCGTCACCTCGTGGAGCTTCTGGAAGTCGTAGCAGCC---CTG 5387 Query 114448 TTCATTG---ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC 114504 ||||| | ||| | ||| ||||| | ||| |||||||| || || | | || || Sbjct 5388 TTCATAGTCGACAAAGGCAGGCAGGGCTAGTGAGGCCAGATTGCAGACGGCGACTTCGTC 5447 Query 114505 CTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTT 114564 | | |||||| | |||||||| || | || |||||| ||||||||||| ||| Sbjct 5448 AGGTGCCGAGTACTCGACGATTTCCGTGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTT 5507 Query 114565 CTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTC 114624 ||||||||| ||| ||| || |||||||| ||||| | || | ||||| || Sbjct 5508 CTTTTGATTACTCTTGCGGTTGCAGTGGTCCTTGTACAGCATAAAGGGATTGCCCGTTTC 5567 Query 114625 CGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTC 114683 ||| || | | || |||| | ||||| | || | || |||| || | | | | Sbjct 5568 CGTCTGTGCTTCCAGGATAGAATACCAGAGCTTCTG-AGCCCGCACCGTCTTGCGGCCAC 5626 Query 114684 GCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGA 114743 | ||||| |||||||||| ||| || || ||||| || ||||| | || | | Sbjct 5627 GGCCCTCGCGCTCGTACTTTTCGTACAGAGCCTCAAATTCATCACCGTAGCAGTCGGCCA 5686 Query 114744 GCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTC 114802 | || || || || | ||||| | ||| | ||| | || | ||| || |||||| Sbjct 5687 GGCC-GGGGCATTCGTTGGGGCACATGAGCGTCCAATCGCCGTTTTTCTCCACGCGCTTC 5745 Query 114803 ATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCC 114862 ||||| ||||| || ||||| || || |||||| || || ||| | || || | Sbjct 5746 ATGAACAGGTCCGGAATCCACAGGGCCAGGAAGAGGTCGCGGGCCCGAACCTCCTCCTTG 5805 Query 114863 CCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 114921 || || || |||| |||| ||| || | | ||| ||||||||||| |||| ||| Sbjct 5806 CCATGGTTCTTGCGCAGATCCAGAAACTCAAACACATCGGCGTGCCACGGCTCCAAGTA 5864 >seq686 Length=19048 Score = 87.8 bits (96), Expect = 2e-12 Identities = 215/321 (67%), Gaps = 9/321 (3%) Strand=Plus/Plus Query 10876 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGG 10935 |||||||||||| || | | || |||||| | || || ||||| || || || | Sbjct 8732 AAAGCCATCCATTTCGGCAAGGATTTGATTCAGTGTGGCCTCTCGTTCCTCGTT-GCCTG 8790 Query 10936 CATACCACCCGCACTG---CGTTG-CTTACCGACGGCGTCAATTTCATCGATGAAAACGA 10991 ||| | || || || | | | ||| || | |||||||| ||||||||||| | | Sbjct 8791 TATAGCCCCGGCCTTGTACCCTGGACTTGCCAATAGCGTCAATCTCATCGATGAAGATTA 8850 Query 10992 TACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACAC 11051 |||| || ||| | || | || | || | || || ||||| | ||| |||| Sbjct 8851 TACAAGGAGCATTCTTGCGACCCTCTGCGAACAAGTCGCGTACTCTGGACGAACCCACAC 8910 Query 11052 CCACAAACATTTCCACAAAATTGG--CGGCGGAACATTGGATGAAGGGGACGTTGGATTC 11109 |||||||||| |||| ||| | || | | || | || |||| ||| || || Sbjct 8911 CCACAAACATCTCCATAAACTCGGACCCACTGACGCT--GAAAAAGGCGACCCCTGACTC 8968 Query 11110 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGC 11169 || || |||| ||| ||||| ||||| ||||| || || || ||||||| || Sbjct 8969 TCCAGCCGTGGCCTTGGCTAGGAGTGTCTTGCCCGTGCCTGGCGGTCCGGCGAGAATAGC 9028 Query 11170 ACCACGTGGGATCCTGGCACC 11190 |||||| |||||| ||||||| Sbjct 9029 ACCACGCGGGATCTTGGCACC 9049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597344781567480