Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq677 259 5e-64 >seq677 Length=7370 Score = 259 bits (286), Expect = 5e-64 Identities = 986/1529 (64%), Gaps = 28/1529 (2%) Strand=Plus/Minus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GATGAC 93956 ||||| ||||||||||| || || || | ||| | || ||||| ||||| | |||| Sbjct 6155 CCGACGCTGTTCAACGCCGGCACGCCTCAGTGTCAGCTTTCGTCGTGCTTCCTCGTTGAC 6096 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| ||| |||| || || | ||||| |||||| || || | ||||| Sbjct 6095 -ATGAAGGAGGACAGCATCGAGGGCATCTACGACACGCTCAAGACATGCGCCATGATCTC 6037 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076 || || || || |||||| ||| || || | ||||| | ||||| ||||| Sbjct 6036 CAAGATGGCCGGCGGCATCGGGCTCAACGTGCATCGGATCCGTGCTACCGGTTCTTACAT 5977 Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 ||| ||||| || || || ||||| || | || ||||| || ||||||||||| | Sbjct 5976 TGCCGGCACCAACGGGACTTCGAACGGTGTCATTCCCATGCTTCGTGTCTTCAACAATAC 5917 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 ||| |||||||| |||||||| || | | || ||| | || || | || | || Sbjct 5916 GGCCCGCTACGTCGACCAGGGCGGCAACAAGCGGCCAGGTGCCTTTGCCATATACTTGGA 5857 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 ||| |||||||| || ||| | || | || ||||| |||||||| ||||| || Sbjct 5856 GCCGTGGCACGCCGATGTGTTTGAGTTTCTGGATCTGCGCAAGAACCATGGCAAGGAGGA 5797 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 || ||||| | ||||||||| || || ||| | || ||||| || ||||| ||||| Sbjct 5796 GGTTCGGGCCCGCGACCTCTTCCTGGCCCTGTGGATTCCGGACCTGTTCATGAAGCGCGT 5737 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376 ||||||||| || |||| || | || ||||| ||||| ||||| ||| ||||| Sbjct 5736 GGAGAAAAACGGCGATTGGACGCTCATGTGCCCCAACGAATGCCCCGGCCTGGCCGACTG 5677 Query 94377 TTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCAAGGCCAGGA 94435 | || ||||| | |||| | |||| | ||| ||||| | | | | Sbjct 5676 CTACGGTGATGAATTTGAGGCTCTGTACGAAAAGTACG-AGCGCGAGGGCCGTGGCCGCA 5618 Query 94436 AGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTA 94495 || || ||| |||||| ||| || ||| |||| | |||| ||| ||||| | Sbjct 5617 AGACGGTGCGGGCTCAGAAGCTCTGGTATTCTATCCTGGAAGCACAGACGGAAACGGGCA 5558 Query 94496 CGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554 |||| || ||| |||||| | ||| |||| |||| || || || |||| || Sbjct 5557 ATCCCTTTATGCTGTACAAGGACCACTG-CAACCGCAAGAGTAATCAAAAGAACCTGGGC 5499 Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614 || ||| ||||| || ||||| || || |||||||| | | || ||||| | Sbjct 5498 ACCATTCGGAGTTCGAACCTTTGCACGGAAATCGTCGAGTACTCGGCACCTGACGAAGTC 5439 Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA-GATGCCTACACGTC 94673 || || || || |||| ||| | |||| | | || || ||| ||| ||| | | Sbjct 5438 GCCGTCTGCAATCTGGCCTCACTAGCCCTGCCTGCCTTTGT-CGACTATG--AACAGGGC 5382 Query 94674 TACTGCTTCGTTC--GATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAAC 94731 | || | | | | | || | ||| |||| ||| || | | ||| ||| Sbjct 5381 TGCTACGACTTCCAGAAGCTCCACGAG---GTGA----CGCAGGTTG--TCGTCCGTAAC 5331 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 || || ||| | |||||| ||| ||||| || ||||| ||| ||| || Sbjct 5330 CTCAATAGGATCATCGACGTCAACCATTACCCAGTTGAAGAGGCCCGCAACAGCAACATG 5271 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851 ||| ||||| || || | || |||||||| | || || || | || | || Sbjct 5270 CGGCACCGGCCGATTGGTGTGGGTGTCCAGGGCCTGGCCGATGCTTTTCTGGCTCTCCGC 5211 Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911 |||| | || ||| || || || | || | | || ||||||| ||| || Sbjct 5210 ATGCCGTTTGAGTCTCCGGAGGCCCGGGAGCTAAACCAGCAAATCTTCGAAACCATCTAC 5151 Query 94912 TACGGGGCCATGAAACAATCCGTCCACTTGGCC-AGATCGGACGGCGGGCCACACGAATC 94970 ||| ||| ||| || | | ||||| ||| || | ||||| || || Sbjct 5150 CACGCCGCCTTGAGTGCCTCGATGGAGCTGGCCAAGAGCGAA----GGGCCCTACTCGTC 5095 Query 94971 GTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCC 95030 ||| |||||||| | ||||| | | ||||| ||| | ||| |||||||| Sbjct 5094 GTTTAAGGGATCGCCGGCGTCGGAGGGCGTGCTCCAGTTTGACATGTGGAAGGTGAAGCC 5035 Query 95031 CTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAA 95090 || | || | || |||||| | ||||| | | | | | || || | || Sbjct 5034 TTCAGAGCTCTGGGAGTGGGAAACGCTACGGGAGCAGATCAAGGAGCATGGCATACGCAA 4975 Query 95091 CGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGA 95150 | ||||| || ||||||||||| |||||| |||| |||||||||| ||||| ||||| Sbjct 4974 CAGTCTGCTGGTAGCCCCCATGCCGACGGCCAGCACGTCGCAGATCCTCGGCAATAACGA 4915 Query 95151 GTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCC 95210 || ||||| || | ||| |||||| | ||| | | || ||||| || || || |||| Sbjct 4914 GTGCTTCGAGCCTTACACGTCCAACATTTACCAGCGACGCGTGCTGGCGGGCGAGTTCCA 4855 Query 95211 CGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGG 95269 || ||||| || || |||||| | | || |||| | ||| ||| | Sbjct 4854 GGTGGTCAACCCCTGGCTGCTCAAGGACCTGGTTGACT-TGGGCTTATGGTCGGACTCGA 4796 Query 95270 TCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGG 95329 | || |||| | | | | ||||| ||| ||||||||||||| | || || | | Sbjct 4795 TGAAAAACCGAATCATTGCGGAAAACGGGTCCATCCAGAACATCCCCAACATCCCTGCTG 4736 Query 95330 ACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACG 95389 || ||||||| || |||||||| || |||||||| ||||||| | | | | | Sbjct 4735 ACGTCAAGGCACTTTACAAGACGGTCTGGGAGATTTCGCAGCGACAGGTGGTGCAGATGG 4676 Query 95390 CGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 |||||| |||||| |||| ||| |||| Sbjct 4675 CGGCCGACCGCGGTGCCTTTATCGACCAG 4647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494715896648760