Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq677 255 6e-63 seq598 95.1 1e-14 seq574 93.3 4e-14 >seq677 Length=7370 Score = 255 bits (282), Expect = 6e-63 Identities = 1004/1552 (65%), Gaps = 49/1552 (3%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 |||||||||| || ||||||||||||| ||| |||| | || | ||| ||| ||| Sbjct 4844 GGTTGACCACCTGGAACTCGCCCGCCAGCACGCGTCGCTGGTAAATGTTGGACGTGTAAG 4903 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || ||| | ||||||||||| || || || | |||| | || ||||||||| || | Sbjct 4904 GCTCGAAGCACTCGTTATTGCCGAGGATCTGCGACGTGCTGGCCGTCGGCATGGGGGCTA 4963 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 ||| || | || || | ||| ||| | || | ||| | || | ||| |||| Sbjct 4964 CCAGCAGACTGTTGCGTATGCCATGCTCCTTGATCTGCTCCCGTAGCGTTTCCCACTCCC 5023 Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCT--CGACTGGCGGG 153265 | ||| | || || || | ||||||||||| |||| | ||| || |||| || || Sbjct 5024 AGAGCTCTGAAGGCTTCACCTTCCACATGTCAAACTGGAGCACGCCCTCCGAC--GCCGG 5081 Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCC--TCG 153323 || ||||| |||| || |||| | |||||| || || | || | || Sbjct 5082 CGATCCCTTAAACGACGAGTAGGGCCCTTCGCTCTTGGCCAGCTC-CATCGAGGCACTCA 5140 Query 153324 AGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCT- 153382 || ||| | | ||| ||||||||| |||||| | || || | ||| || || Sbjct 5141 AG-GCGGCGTGGTAGATGGTTTCGAAGATTTGCTGGTTTAGCTC--CCGGGCCTCCGGAG 5197 Query 153383 -CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGA 153441 ||| |||||||||| || || ||| || |||||||| ||||||| ||| || || | Sbjct 5198 ACTCAAACGGCATGCGGAGAGCCAGAAAAGCATCGGCCAGGCCCTGGACACCCACACCAA 5257 Query 153442 TGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCG-CTATGGGATAGTGATTGCGATCG 153500 | || || ||| | ||||||| | || ||| | | || || || ||| ||| Sbjct 5258 TCGGCCGGTGCCGCATGTTGCTGTTGCGGGC-CTCTTCAACTGGGTAATGGTTGACGTCG 5316 Query 153501 ATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCA 153560 || || | |||||||| || || || || | || | | | | || |||| ||| || Sbjct 5317 ATGATCCTATTGAGGTTACGGACGACAACCTGCGTCACCTCGTGGAGCTTCTGGAAGTCG 5376 Query 153561 TAG--GTCAT-TTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAG 153617 ||| | | | ||| | | || || | | || ||| | || |||||||| ||| Sbjct 5377 TAGCAGCCCTGTTCATAGTCG---ACAAAGGCAGGCAGGGCTAGTGAGGCCAGATTGCAG 5433 Query 153618 ACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTT 153676 ||||| || || || | || ||||| ||||| || | ||| ||||| | Sbjct 5434 ACGGCGACTTCGTCAGGTGCCGA-GTACTCGACGATTTCCGTGCAAAGGTTCGAACTCCG 5492 Query 153677 TATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTA 153736 ||| ||||| || | ||||| || ||||| ||||| ||| ||| | ||||| | Sbjct 5493 AATGGTGCCCAGGTTCTTTTGATTACTCTTGCGGTTGCAGTGGTCCTTGTACAGCATAAA 5552 Query 153737 CGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATGC---AGGTCCTGCGCTCG 153793 || ||| || || || | ||| | |||| | || | || | ||| || || Sbjct 5553 GGGATTGCCCGTTTCCGTCTGTGCTTCCAGGATAGA---ATACCAGAGCTTCTGAGCCCG 5609 Query 153794 CACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTC 153853 |||| || || |||||||||| |||||| |||||||| |||||| || || Sbjct 5610 CACCGTCTTGCGGCCACGGCCCTCGCGCTCGTACTTTTCGTACAGAGCCTCAAATTCATC 5669 Query 153854 GCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTC 153913 |||||||||||||| |||||||| || | | || ||||| |||| ||| |||| | Sbjct 5670 ACCGTAGCAGTCGGCCAGGCCGGGGCATTCGTTGGGGCACATGAGCGTCCA---ATCGCC 5726 Query 153914 GGCGTT---GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCG 153970 | || ||||| ||||||||| ||||| | ||| || || | ||||||||| Sbjct 5727 GTTTTTCTCCACGCGCTTCATGAACAGGTCCGGAATCCACAGGGCCAGGAAGAGGTCGCG 5786 Query 153971 CGCCTTGCAATCCTCCGCGCCCATG----TTGCGTTTCAGATTGAGCACGCTATAGATGT 154026 ||| |||||| | ||||| ||||| ||||| || | | | | | Sbjct 5787 GGCCCGAACCTCCTCCTTG-CCATGGTTCTTGCG---CAGATCCAGAAACTCAAACACAT 5842 Query 154027 CGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGAT 154083 |||||||||| || || | ||| | ||| | ||||||| ||| || |||||||| | Sbjct 5843 CGGCGTGCCACGGCTCCAAGTATATGGCAAAGGCACCTGGCCGCTTGTTGCCGCCCTGGT 5902 Query 154084 CGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGC 154143 |||||| ||| || ||||||||||||| || | |||||| | ||| | | || | Sbjct 5903 CGACGTAGCGGGCCGTATTGTTGAAGACACGAAGCATGGGAATGACACCGTTCGAAGTCC 5962 Query 154144 CGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGC 154203 ||||||| || | ||| || || | |||||||||| | || |||| Sbjct 5963 CGTTGGTGCCGGCAATGTAAGAACCGGTAGCACGGATCCGATGCACGTTGAGCCCGATGC 6022 Query 154204 CGCCGCCGTACTTTGATATGGCAGCGCA-GTCGCCCAGCGTCCTGTAGATGCCGTCGATG 154262 ||||| | ||| || || ||||| ||| ||||| ||||||||| |||||| Sbjct 6023 CGCCGGCCATCTTGGAGATCATGGCGCATGTC-TTGAGCGTGTCGTAGATGCCCTCGATG 6081 Query 154263 CTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATG-CGCGTTCCCGC 154321 || || || | | | | | ||| ||||| | | || | || |||| || || Sbjct 6082 CTGTCCTCCTTCATGTCAACGAGGAAGCACGACGAAAGCTG-ACACTGAGGCGTGCCGGC 6140 Query 154322 CGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTC 154381 || || || || ||| || || || | || | ||| | | |||||| || Sbjct 6141 GTTGAACAGCGTCGGCGACGCATGGGTGAAGAACTTGCTGGACATGAGGTTGTACGTCTC 6200 Query 154382 GATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTG 154441 || | | ||||||| |||| || || | || |||||||||| |||||| || Sbjct 6201 GAGGACTCGGTCGATATTGCCGCCCCATATACCCACGGCAACGCGCATGATCATGTGTTG 6260 Query 154442 CGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTA 154501 || || || ||| | ||| | ||| | | ||| | ||| || || ||| | Sbjct 6261 AGGGCGCTCAACGATCTTGCCGTCGAGCTTGAGCAAATAAGAACGTTCCAGTGTCTTGAA 6320 Query 154502 ACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCGCATCGAGC 154553 || ||||||| ||| | ||| || | |||| |||||||| |||||| Sbjct 6321 GCCAAAATACTGGTAGTTAAAGTCCCGGTCATAGATGATGGCCGAGTCGAGC 6372 >seq598 Length=71582 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 || || |||||||| |||||||||| |||||| || || |||||||| || | | | Sbjct 1596 TCTTTCTGAATGTTATAGTCGCTCAGAGTACGTCCATCTTCCAGTTGTTTTCCAGCAAAT 1537 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TT 138541 || || ||||||||||| ||||| || ||||| ||||| || |||| | || | || Sbjct 1536 ATGAGGCGCTGTTGGTCGGGAGGAATGCCTTCCTTGTC-TTGTATTTTCGACTTCACGTT 1478 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | || || | || || || || | || | ||| || || |||||||| || | Sbjct 1477 G-TCAATCGTATCCGAAGATTCAACTTCCAAGGTAATCGTCTTTCCCGTCAGAGTCTTGA 1419 Query 138602 CAAAAATCTGCAT 138614 |||| || ||||| Sbjct 1418 CAAAGATTTGCAT 1406 >seq574 Length=30825 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||||||||||||||| || || || ||||| || || |||| | | Sbjct 26604 CTCCTTCTGGATGTTGTAGTCGCTCATGGTTCGGCCATCTTCGAGCTGCTTTCCGGCAAA 26663 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATT 138541 ||| || ||||| ||||| || || || || || || || ||| | || | || | | Sbjct 26664 GATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATC-CTGAATCTTGGACTTGACGT 26722 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | |||||| | ||||||||||| | || | || || || || || ||||| | Sbjct 26723 TATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGTGAGGGTTTTGA 26782 Query 138602 CAAAAATCTGCAT 138614 | || |||||||| Sbjct 26783 CGAAGATCTGCAT 26795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496255073926320