Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq677 145 1e-29
>seq677
Length=7370
Score = 145 bits (160), Expect = 1e-29
Identities = 562/862 (65%), Gaps = 22/862 (3%)
Strand=Plus/Plus
Query 204935 TGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATT--CCGTTCTCCA 204992
|| ||| ||||||||| ||| ||||||||||| ||| || || ||| ||||| |||
Sbjct 5512 TGATTACTCTTGCGGTTGCAGTGGTCCTTGTACAGCATAAAGGG-ATTGCCCGTT-TCCG 5569
Query 204993 TCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGT-ACATC 205051
|||| | | ||| || ||| | | ||||| ||| ||| | || |
Sbjct 5570 TCTGTGCTTCCAGGATAGAATACCAGAGCTTCTGAGCCCGCACCGTCTTGCGGCCACGGC 5629
Query 205052 CCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGC 205111
||| | | |||||| ||| |||||| ||| |||| ||| |||||| ||| |||
Sbjct 5630 CCTCGCG-CTCGTACTTTTCGTACAGAGCCTCAAATTCATCACCGTAGCAGTCGGCCAGG 5688
Query 205112 CCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACC---CTCTCC 205168
|| || |||| ||||| ||||| || | ||| ||| ||| |||| || | || |
Sbjct 5689 CCGGGGCATTCGTTGGGGCACATGAGCGTCCA-ATCGC--CGTTTTTCTCCACGCGCTTC 5745
Query 205169 ATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCT 205228
|| |||||||| ||||||||| | || || || ||||||| || | || |
Sbjct 5746 ATGAACAGGTCCGGAATCCACAGGGCCAGGAAGAGGTCGCGGGCCCGAACCTCCTCCTTG 5805
Query 205229 CCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCAC 205288
||| ||||||| || ||||| | | | ||||||||||||||||| || |
Sbjct 5806 CCATGGTTCTTGCGCAGATCCAGAAACTCAAACACATCGGCGTGCCACGGCTCCAAGTAT 5865
Query 205289 ACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTG 205348
| ||| | || ||||||| |||||| || |||||||| || ||| | | | ||||
Sbjct 5866 ATGGCAAAGGCACCTGGCCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTG 5925
Query 205349 AAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAG 205408
|| || || ||||| || | | |||||| | |||||||| |||| | ||| ||
Sbjct 5926 AAGACACGAAGCATGGGAATGACACCGTTCGAAGTCCCGTTGGTGCCGGCAATGTAAGAA 5985
Query 205409 CCTTCAGCCCTCA--CGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCT 205466
|| ||| | | || || | | | || || || ||||| | ||||| ||||
Sbjct 5986 CCGGTAGCACGGATCCGATGCACGTTG-AGC-CCGATGCCGCCGGCCATCTTGGAGATCA 6043
Query 205467 GGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC-AC 205524
|||||| ||||| || ||| ||||||||| ||||| || ||| || |||| ||
Sbjct 6044 TGGCGCATGTCTTG-AGCGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCA-TGTCAAC 6101
Query 205525 CAGATAGCACGAAGCCAGCTTGGCAAAGTTG-GTGCCCGCGTGGAAGAGCGTGGGGCTGG 205583
|| ||||||| | ||| || || | | ||||| |||| ||| ||||| || |
Sbjct 6102 GAGGAAGCACGACGAAAGC-TGACACTGAGGCGTGCCGGCGTTGAACAGCGTCGGCGACG 6160
Query 205584 CGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGA 205643
| ||| ||||| ||| | || |||| ||||| || || | || | || |
Sbjct 6161 CATGGGTGAAGAACTTGCTGGACATGAGGTTGTACGTCTCGAGGACTCGGTCGATATTGC 6220
Query 205644 AGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCT 205703
||| ||||| | ||| | | ||||| | ||||||||| | ||| | | | |
Sbjct 6221 CGCCCCATATACCCACGGCAACGCGCATGATCATGTGTTGAGGGCGCTCAACGATCTTGC 6280
Query 205704 CGTTCACCTTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTGAAGGTGT 205763
||| | |||||||| ||| | | || || || || | ||||| | | | || |
Sbjct 6281 CGTCGAGCTTGAGCAAATAAGAACGTTCCAGTGTCTTGAAGCCAAAATACTGGTAGTTAA 6340
Query 205764 AGTCCCTAGAATAGTCGATGGC 205785
|||||| |||| ||||||
Sbjct 6341 AGTCCCGGTCATAGATGATGGC 6362
Score = 123 bits (136), Expect = 4e-23
Identities = 328/488 (67%), Gaps = 10/488 (2%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897
|| ||| ||||||||||| |||| | | || | ||||| | | ||| ||||||||||
Sbjct 4497 CTGGTCTACCGTGAACTGGATGGGCGCCGCCGCCG-CCTGCGTACGCAGGTAGTACATGC 4555
Query 203898 CGGTCTTTAGGCCCTTCTGCCA-CCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|||| || || ||| || ||| || ||| | |||||| | | ||||| ||
Sbjct 4556 CGGTTTTGAGCCCCAGCTTCCAGCCAGTA-AAATGCATGCTGGTGATTTTGCCCATCGAC 4614
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015
||||| |||||| ||||| || |||||| |||||||| |||||| || || || ||
Sbjct 4615 GGGTCTTTCATGTGGATGTTGAGCGACTGGGACTGGTCGAT-AAAGGCACCGCGGTCGGC 4673
Query 204016 GGCCATATTGA-TAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGG 204074
||||| | | | ||| ||||||||||||||| ||||||||| | | | ||
Sbjct 4674 CGCCATCTGCACCACCTGTC-GCTGCGAAATCTCCCAGACCGTCTTGTAAAGTGCCTTGA 4732
Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133
|| ||| | | | | || || ||| || ||||| || || || | || |
Sbjct 4733 CGTCAGCAGGGATGT-TGGGGATGTTCTGGATGGACCCGTTTTCCGCAATGATTCGGTTT 4791
Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| || ||| ||| | |||||| | ||| ||| | ||| ||||||||
Sbjct 4792 TTCATCGAGTCCGACCATAAGCCCAAGTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACC 4851
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| ||| || || || | |||||| | ||| | | | |||| ||| | || |||||
Sbjct 4852 ACCTGGAACTCGCCCGCCAGCACGCGTCGCTGGTAAATGTTGGACGTGTAAGGCTCGAAG 4911
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
|||||| ||||||| ||||| | ||||||||||| |||||||| || | |||||
Sbjct 4912 CACTCGTTATTGCCGAGGATCTGCGACGTGCTGGCCGTCGGCATGGGGGCTACCAGCAGA 4971
Query 204314 GAGTTGCG 204321
||||||
Sbjct 4972 CTGTTGCG 4979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795143461521360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |