Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq677 145 1e-29 >seq677 Length=7370 Score = 145 bits (160), Expect = 1e-29 Identities = 562/862 (65%), Gaps = 22/862 (3%) Strand=Plus/Plus Query 204935 TGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATT--CCGTTCTCCA 204992 || ||| ||||||||| ||| ||||||||||| ||| || || ||| ||||| ||| Sbjct 5512 TGATTACTCTTGCGGTTGCAGTGGTCCTTGTACAGCATAAAGGG-ATTGCCCGTT-TCCG 5569 Query 204993 TCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGT-ACATC 205051 |||| | | ||| || ||| | | ||||| ||| ||| | || | Sbjct 5570 TCTGTGCTTCCAGGATAGAATACCAGAGCTTCTGAGCCCGCACCGTCTTGCGGCCACGGC 5629 Query 205052 CCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGC 205111 ||| | | |||||| ||| |||||| ||| |||| ||| |||||| ||| ||| Sbjct 5630 CCTCGCG-CTCGTACTTTTCGTACAGAGCCTCAAATTCATCACCGTAGCAGTCGGCCAGG 5688 Query 205112 CCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACC---CTCTCC 205168 || || |||| ||||| ||||| || | ||| ||| ||| |||| || | || | Sbjct 5689 CCGGGGCATTCGTTGGGGCACATGAGCGTCCA-ATCGC--CGTTTTTCTCCACGCGCTTC 5745 Query 205169 ATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCT 205228 || |||||||| ||||||||| | || || || ||||||| || | || | Sbjct 5746 ATGAACAGGTCCGGAATCCACAGGGCCAGGAAGAGGTCGCGGGCCCGAACCTCCTCCTTG 5805 Query 205229 CCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCAC 205288 ||| ||||||| || ||||| | | | ||||||||||||||||| || | Sbjct 5806 CCATGGTTCTTGCGCAGATCCAGAAACTCAAACACATCGGCGTGCCACGGCTCCAAGTAT 5865 Query 205289 ACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTG 205348 | ||| | || ||||||| |||||| || |||||||| || ||| | | | |||| Sbjct 5866 ATGGCAAAGGCACCTGGCCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTG 5925 Query 205349 AAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAG 205408 || || || ||||| || | | |||||| | |||||||| |||| | ||| || Sbjct 5926 AAGACACGAAGCATGGGAATGACACCGTTCGAAGTCCCGTTGGTGCCGGCAATGTAAGAA 5985 Query 205409 CCTTCAGCCCTCA--CGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCT 205466 || ||| | | || || | | | || || || ||||| | ||||| |||| Sbjct 5986 CCGGTAGCACGGATCCGATGCACGTTG-AGC-CCGATGCCGCCGGCCATCTTGGAGATCA 6043 Query 205467 GGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC-AC 205524 |||||| ||||| || ||| ||||||||| ||||| || ||| || |||| || Sbjct 6044 TGGCGCATGTCTTG-AGCGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCA-TGTCAAC 6101 Query 205525 CAGATAGCACGAAGCCAGCTTGGCAAAGTTG-GTGCCCGCGTGGAAGAGCGTGGGGCTGG 205583 || ||||||| | ||| || || | | ||||| |||| ||| ||||| || | Sbjct 6102 GAGGAAGCACGACGAAAGC-TGACACTGAGGCGTGCCGGCGTTGAACAGCGTCGGCGACG 6160 Query 205584 CGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGA 205643 | ||| ||||| ||| | || |||| ||||| || || | || | || | Sbjct 6161 CATGGGTGAAGAACTTGCTGGACATGAGGTTGTACGTCTCGAGGACTCGGTCGATATTGC 6220 Query 205644 AGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCT 205703 ||| ||||| | ||| | | ||||| | ||||||||| | ||| | | | | Sbjct 6221 CGCCCCATATACCCACGGCAACGCGCATGATCATGTGTTGAGGGCGCTCAACGATCTTGC 6280 Query 205704 CGTTCACCTTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTGAAGGTGT 205763 ||| | |||||||| ||| | | || || || || | ||||| | | | || | Sbjct 6281 CGTCGAGCTTGAGCAAATAAGAACGTTCCAGTGTCTTGAAGCCAAAATACTGGTAGTTAA 6340 Query 205764 AGTCCCTAGAATAGTCGATGGC 205785 |||||| |||| |||||| Sbjct 6341 AGTCCCGGTCATAGATGATGGC 6362 Score = 123 bits (136), Expect = 4e-23 Identities = 328/488 (67%), Gaps = 10/488 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 || ||| ||||||||||| |||| | | || | ||||| | | ||| |||||||||| Sbjct 4497 CTGGTCTACCGTGAACTGGATGGGCGCCGCCGCCG-CCTGCGTACGCAGGTAGTACATGC 4555 Query 203898 CGGTCTTTAGGCCCTTCTGCCA-CCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 |||| || || ||| || ||| || ||| | |||||| | | ||||| || Sbjct 4556 CGGTTTTGAGCCCCAGCTTCCAGCCAGTA-AAATGCATGCTGGTGATTTTGCCCATCGAC 4614 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015 ||||| |||||| ||||| || |||||| |||||||| |||||| || || || || Sbjct 4615 GGGTCTTTCATGTGGATGTTGAGCGACTGGGACTGGTCGAT-AAAGGCACCGCGGTCGGC 4673 Query 204016 GGCCATATTGA-TAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGG 204074 ||||| | | | ||| ||||||||||||||| ||||||||| | | | || Sbjct 4674 CGCCATCTGCACCACCTGTC-GCTGCGAAATCTCCCAGACCGTCTTGTAAAGTGCCTTGA 4732 Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 || ||| | | | | || || ||| || ||||| || || || | || | Sbjct 4733 CGTCAGCAGGGATGT-TGGGGATGTTCTGGATGGACCCGTTTTCCGCAATGATTCGGTTT 4791 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || || ||| ||| | |||||| | ||| ||| | ||| |||||||| Sbjct 4792 TTCATCGAGTCCGACCATAAGCCCAAGTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACC 4851 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || || | |||||| | ||| | | | |||| ||| | || ||||| Sbjct 4852 ACCTGGAACTCGCCCGCCAGCACGCGTCGCTGGTAAATGTTGGACGTGTAAGGCTCGAAG 4911 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 |||||| ||||||| ||||| | ||||||||||| |||||||| || | ||||| Sbjct 4912 CACTCGTTATTGCCGAGGATCTGCGACGTGCTGGCCGTCGGCATGGGGGCTACCAGCAGA 4971 Query 204314 GAGTTGCG 204321 |||||| Sbjct 4972 CTGTTGCG 4979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795143461521360