Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq598 95.1 8e-15
>seq598
Length=71582
Score = 95.1 bits (104), Expect = 8e-15
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
||||| || | ||||||||||||||||| || || ||||| ||| || | ||| ||
Sbjct 1620 CGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATGTTATAGTCGCTCAGAGTACGTCCA 1561
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| |||| |||||| || |||| || | ||||| || || | || | |||||| |||
Sbjct 1560 TCTTCCAGTTGTTTTCCAGCAAATATGAGGCGCTGTTGGTCGGGAGGAATGCCTTCCTTG 1501
Query 39625 TCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAAT 39683
|| |||||| || | ||| | | | || || | ||| || ||||| |||||
Sbjct 1500 TCTTGTATTTTCGACTTCA-CGTTGTCAATCGTATCCGAAGATTCAACTTCCAAGGTAAT 1442
Query 39684 TGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| || ||||| | ||| || || ||||| |||||
Sbjct 1441 CGTCTTTCCCGTCAGAGTCTTGACAAAGATTTGCAT 1406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347364600157373
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |