Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1133 140 2e-27 >seq1133 Length=6413 Score = 140 bits (154), Expect = 2e-27 Identities = 913/1454 (63%), Gaps = 31/1454 (2%) Strand=Plus/Plus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 || ||||| ||| || ||||| ||| || || ||| | || | ||||| | Sbjct 4066 TTGGTAATGACAATCTTATTGGACTTGCCGGTGCCCTTTTCAACTGCCGAAACATTCATG 4125 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || || || || || | |||||| ||||| ||||| || || || || | | ||||| Sbjct 4126 ATGCCGTTAGCGTCAACATCAAACGTGACCTCAATCTGGGGAACACCGCGAGGCGCAGGC 4185 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | |||| | || || |||||| || || ||| | ||||| Sbjct 4186 GGGATGCCGGTGAGCTCAAATTTGCCGAGTAGATTATTGTCCTTGGTGCGCTGGCGTTCG 4245 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||| | | |||||| || ||| |||||| || ||| | || | || || | Sbjct 4246 CCCTCGTACACCTGGATAAGGACACCAGGTTGATTGTCGGAAAATGTGGAGAAGACCTCG 4305 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 || || || ||||| || ||||| | ||| | |||||||| || || || || Sbjct 4306 GACTTCTTGGTGGGAATGGTGGTGTTGCGCGGAATCAGCTTGGTCATCATGCCGCCAGCA 4365 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 517571 || || | ||| || || | || | |||||| | || | ||| | || | | || Sbjct 4366 GTCTCAATACCGAGGGACAAGGGGGCGACATCCAGTAACAGAATCTCGTTGGTCGACTTG 4425 Query 517572 CATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 | | || | ||| | ||| || || || | || ||||| || ||||| || || Sbjct 4426 GACGAAGTATCTCCAGATAAAATGGCAGCCTGGACGGCTGCACCGTAGGCAACGGCCTCG 4485 Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT- 517689 || || || | | | || | | ||||| ||||| | | | || || | ||| Sbjct 4486 TCGGGGTTGATCGACTTGTTGGGCTCCTTACCGTTGAAGTAGTCGGTAATGAGCT-TCTG 4544 Query 517690 --TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 517747 ||| ||||| || | || || || || | ||||| || || || || || Sbjct 4545 GATACGG--GGAATCCGTGTAGAGCCACCGACGAGGACAATCTCGTGGACTTGGCTCTTG 4602 Query 517748 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCT 517807 || | || | |||| | || || || || | || | | ||||| ||| Sbjct 4603 TCAATCTTGGCATCCGCAAGGACGCGGTCGACTGGCTGAATGGTTGAGCGGAACAAATCT 4662 Query 517808 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGTGACATTATAATCAATTCCTTCG 517864 ||||| || || || ||| | |||| |||| | ||||||| || ||| Sbjct 4663 TGGCAAAGCTCCTCAAAGCGAGCACGGGTAATGGAAGTG---TAGAAATCAATACCCTCG 4719 Query 517865 AACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGT 517924 |||| ||| || | ||||||| || || | ||| ||||| |||| || || || || Sbjct 4720 AACAGAGAGTCGATCTCAATCGAGGTCTGGGCCGAGGAAGACAGTGTGCGCTTGGCTCGC 4779 Query 517925 TCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT-CAAATCTGTTTTATA 517983 || || || || | || | |||| ||| |||| | || |||||| | || | Sbjct 4780 TCGCAGGCAGTGCGAAGCCGGCGTAGGGCACG-GCTGTTCGAGGACAAATCCTTCTTGTG 4838 Query 517984 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 518043 || | |||||| || | ||| | | || | || || || ||||| ||||| || Sbjct 4839 CTTGCGCTTGAATTCATTCACAAAGTGGTTGACCAAGCGGTTGTCGAAATCCTCACCGCC 4898 Query 518044 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 518103 | | || | || | || | | |||| ||||| ||| || || | | | || Sbjct 4899 AAGATGGGTGTCGCCAGCGGTCGACTTGACTTCGAAAATTCCCTCCTCGATGGTTAGGAG 4958 Query 518104 AGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 518163 | |||||| ||| |||||||||| |||||||| || || || || || Sbjct 4959 GGAGACATCAAAGGTACCACCACCCAAGTCAAAAATGAGGACGTTGCGCTCGCCCTCCAC 5018 Query 518164 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223 || || || || || || |||| ||| || || || ||||| || || || | | ||| Sbjct 5019 CTTCTTGTCCAGGCCGTATGCAATAGCGGCCGCCGTGGGTTCGTTGATGATGCGGAGAAC 5078 Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 ||| ||||| || || || ||||| || |||||||| | ||| || || || || Sbjct 5079 ATTCAGACCTGCGATAAGGCCGGCATCCTTGGTGGCTTGACGTTGGCTGTCATTGAAGTA 5138 Query 518284 TGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCT-TGCCGTTT 518342 ||||||||||| || ||||||| || || ||| | || ||| || || || | Sbjct 5139 GGCAGGAACAGTGATGACGGCATTGGTAACAGTACCACCCAGAT-AGCTCTCGGCGGTCT 5197 Query 518343 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC---TGGGGAATATTGCTTGGATT 518399 ||| ||| | || | ||| || ||||| | || || | ||| || ||| | Sbjct 5198 CGCGCATCTTAGTCAACACCATCGAAGAAATCTCCTCGGGTGTGAAATTTTTCTT--CTC 5255 Query 518400 CATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT---AATAACTTTAAATG 518456 | |||| | ||||| | || || || | || |||| |||||| | Sbjct 5256 CCCCTTGA-ACTCGACTTCTATCACAGG---CTTGCCGGCTTTGTCGATAATTTTAAAAG 5311 Query 518457 GCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTT 518516 | | | ||||| || | ||||| ||| |||| | | |||||| ||||| | Sbjct 5312 GGAAATGCTTCATGTCGGCCTGAACTTCAGCGTCGCTAAACTTGCGACCAATCAATCGCT 5371 Query 518517 TTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAA 518576 | ||||| |||| || || || || || || |||||| || || ||||| || | Sbjct 5372 TCGCATCGAAAACGGTGTTATGAGGGTTCATAGCCACTTGATTCTTCGCGGCATCGCCGA 5431 Query 518577 TCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCAT 518636 |||| | ||||| || || || | |||| | || ||||| || || || |||||||||| Sbjct 5432 TCAGGCGCTCTGTGTCGGTGAAGGCAACAAAGGAGGGAGTAGTCCGGTTGCCTTGATCAT 5491 Query 518637 TCGCAATAATTTCA 518650 | ||||| || ||| Sbjct 5492 TGGCAATGATGTCA 5505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780763794889786