Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq598 118 7e-22
seq574 100 2e-16
>seq598
Length=71582
Score = 118 bits (130), Expect = 7e-22
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
|||||||||||||||||||||||||| || | ||| |||| ||||| ||||||||
Sbjct 1602 GTGCTTTCTTTCTGAATGTTATAGTCGCTCAGAGTACGTCCATCTTCCAGTTGTTTTCCA 1543
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904
|||||||| || || || ||||| | || | || |||||||| || ||| ||
Sbjct 1542 GCAAATATGAGGCGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGTATTTTCGACTTC 1483
Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
||| | |||| || | ||||| || | ||| || || |||||||| ||||||
Sbjct 1482 ACGTTGTCAATCGTATCCGAAGATTCAACTTCCAAGGTAATCGTCTTTCCCGTCAGAGTC 1423
Query 34965 TTCACAAAGATCTGCATA 34982
|| |||||||| ||||||
Sbjct 1422 TTGACAAAGATTTGCATA 1405
>seq574
Length=30825
Score = 100 bits (110), Expect = 2e-16
Identities = 145/204 (71%), Gaps = 8/204 (4%)
Strand=Plus/Plus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
||||| || ||||| ||||| ||||| | | |||| |||| || ||||| ||||||
Sbjct 26599 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCATGGTTCGGCCATCTTCGAGCTGCTTTCCG 26658
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904
||||| || || || |||||||| | || | |||||||| || |||||| |||
Sbjct 26659 GCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGAATCTTGGACTTG 26718
Query 34905 ACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960
|| | ||||||| ||| | ||| || || | ||| || || || ||||||||
Sbjct 26719 AC----GTTATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGTGAG 26774
Query 34961 AGTCTTCACAAAGATCTGCATATT 34984
|| || || ||||||||||| ||
Sbjct 26775 GGTTTTGACGAAGATCTGCATCTT 26798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324628927406568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |