Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq598 118 7e-22 seq574 100 2e-16 >seq598 Length=71582 Score = 118 bits (130), Expect = 7e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 |||||||||||||||||||||||||| || | ||| |||| ||||| |||||||| Sbjct 1602 GTGCTTTCTTTCTGAATGTTATAGTCGCTCAGAGTACGTCCATCTTCCAGTTGTTTTCCA 1543 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 |||||||| || || || ||||| | || | || |||||||| || ||| || Sbjct 1542 GCAAATATGAGGCGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGTATTTTCGACTTC 1483 Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 ||| | |||| || | ||||| || | ||| || || |||||||| |||||| Sbjct 1482 ACGTTGTCAATCGTATCCGAAGATTCAACTTCCAAGGTAATCGTCTTTCCCGTCAGAGTC 1423 Query 34965 TTCACAAAGATCTGCATA 34982 || |||||||| |||||| Sbjct 1422 TTGACAAAGATTTGCATA 1405 >seq574 Length=30825 Score = 100 bits (110), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| ||||| | | |||| |||| || ||||| |||||| Sbjct 26599 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCATGGTTCGGCCATCTTCGAGCTGCTTTCCG 26658 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 ||||| || || || |||||||| | || | |||||||| || |||||| ||| Sbjct 26659 GCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGAATCTTGGACTTG 26718 Query 34905 ACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || | ||||||| ||| | ||| || || | ||| || || || |||||||| Sbjct 26719 AC----GTTATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGTGAG 26774 Query 34961 AGTCTTCACAAAGATCTGCATATT 34984 || || || ||||||||||| || Sbjct 26775 GGTTTTGACGAAGATCTGCATCTT 26798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324628927406568