Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq598 141 7e-29 >seq598 Length=71582 Score = 141 bits (156), Expect = 7e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 ||||| | || | ||| | || || ||||| || |||||||| |||| | ||||| Sbjct 1167 AAACGAAGGACAAGATGCAACGTGGACTCTTTCTGAATATTGTAGTCGGACAGAGTTCGA 1108 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 |||| || | |||||||| ||||| |||| ||||||||||| || |||||||| || Sbjct 1107 CCATCCTCGAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCC 1048 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 || || ||||| ||| || ||| | || | ||||| |||| ||| ||||| |||||| Sbjct 1047 TTGTCCTGAATCTTTGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAGAGTG 988 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | ||| ||||| || || || || || ||||| ||||| Sbjct 987 ATCGTCTTGCCAGTCAACGTCTTGACGAATATTTGCAT 950 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 || || ||||| || || ||||| || | || || | | |||| || | ||| || || Sbjct 1374 GTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTCCGGCCATCCTCAAGTTGTTTTCCA 1315 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 || ||||||| ||||| || || || || ||||| || ||||| ||||| || || Sbjct 1314 GCGAATATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTG 1255 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 || | || | ||||| |||| ||| ||||| | || | ||| ||||||||||| || Sbjct 1254 ACGTTGTCGATGGTGTCGGACGATTCGACTTCCAACGTAATCGTCTTGCCGGTTAATGTC 1195 Query 101453 TTTACAAATATCTGCAT 101469 || || || || ||||| Sbjct 1194 TTGACGAAGATTTGCAT 1178 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 101278 TTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAA 101337 |||||| || || || || ||| | ||| | |||| |||| ||| || || ||||| Sbjct 1597 TTCTTTCTGAATGTTATAGTCGCTCAGAGTACGTCCATCTTCCAGTTGTTTTCCAGCAAA 1538 Query 101338 TATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAAT 101397 ||| | |||||||| ||||| ||||||||||| || ||||| ||||| || || | Sbjct 1537 TATGAGGCGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGTATTTTCGACTTCACGTT 1478 Query 101398 TTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTAC 101457 || | || || || | ||| ||||| | || | ||| || || || | ||| || || Sbjct 1477 GTCAATCGTATCCGAAGATTCAACTTCCAAGGTAATCGTCTTTCCCGTCAGAGTCTTGAC 1418 Query 101458 AAATATCTGCAT 101469 ||| || ||||| Sbjct 1417 AAAGATTTGCAT 1406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396272696191617