Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq598 138 9e-28 >seq598 Length=71582 Score = 138 bits (152), Expect = 9e-28 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| | |||| |||||| ||||||||||| || || ||| ||||| | || || | ||| Sbjct 1153 ATGCAACGTGGACTCTTTCTGAATATTGTAGTCGGACAGAGTTCGACCATCCTCGAGCTG 1094 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 |||||| ||||| ||||| ||||||||||||| ||||| |||||||||||| |||||| Sbjct 1093 CTTACCAGCAAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 1034 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 | || ||| | | | | || |||| || || |||| || ||||| || || || Sbjct 1033 TGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAGAGTGATCGTCTTGCCAGT 974 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || || || || ||||| Sbjct 973 CAACGTCTTGACGAATATTTGCAT 950 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||||||||| |||||| ||||||||||| || || || | | | || |||||||| Sbjct 925 ATGTAGCGTTGACTCTTTCTGAATATTGTAGTCGGACAGGGTCCTGCCATCCTCCAACTG 866 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 || |||||||| |||| || ||||| || | |||| ||||||||||| ||||| Sbjct 865 TTTTCCGGCAAAGATCAAGCGTTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTT 806 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || ||| | | | || || |||| ||| ||||| | || ||||| || || || Sbjct 805 GGACTTGACATTATCGATAGTATCAGACGACTCTACCTCAAGAGTGATCGTCTTGCCAGT 746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380932116998463