Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq677 398 1e-105 >seq677 Length=7370 Score = 398 bits (440), Expect = 1e-105 Identities = 945/1411 (67%), Gaps = 43/1411 (3%) Strand=Plus/Plus Query 212887 CCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCT 212946 ||||| ||||| ||| |||||||| | |||||| || || | ||||| | | || Sbjct 4823 CCAGGTCCTTGAGCAGCCAGGGGTTGACCACCTGGAACTCGCCCGCCAGCACGCGTCGCT 4882 Query 212947 GGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGC 213006 |||||| ||| || ||||| ||||||| || |||||| || || || ||||| | |||| Sbjct 4883 GGTAAATGTTGGACGTGTAAGGCTCGAAGCACTCGTTATTGCCGAGGATCTGCGACGTGC 4942 Query 213007 TGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGC 213066 |||| || |||||||| || ||||| |||||||| | | || ||||| ||| | Sbjct 4943 TGGCCGTCGGCATGGGGGCTACCAGCAGACTGTTGCGTATGCCATGCTCCTTGATCTGCT 5002 Query 213067 GCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGT 213126 ||| ||| | |||| ||||| | || ||| |||||| |||||||||| Sbjct 5003 CCCGTAGCGTTTCCCACTCCCAGAGCTCTGA-AGG--------CTTCACCTTCCACATGT 5053 Query 213127 CAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCAT-GC 213185 ||||||| | | ||| | | | || |||| | || |||||||| || | || Sbjct 5054 CAAACTGGAGCACGCCCTCCGACGCCGGCGATCCCTTAAACGACGAGTAGGGCCCTTCGC 5113 Query 213186 TCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCC 213245 || ||||||||||| || || || ||| |||| |||||||||||| || || | | Sbjct 5114 TC-TTGGCCAGCTCCATCGAGGCACTCAAGGCGGCGTGGTAGATGGTTTCGAAGATTTGC 5172 Query 213246 CTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACA-CATC 213304 ||| |||| | |||||| || ||| || ||||| | | | ||| | |||| Sbjct 5173 TGGTTTAGCTCCCGGGCCTCCGGAGACTCAAACGGCATGCGGA-GAGCCAGAAAAGCATC 5231 Query 213305 AGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTC 213364 ||||| |||||||| || | || || || | ||| | || ||| ||| | ||| Sbjct 5232 GGCCAGGCCCTGGACACCCACACCAATCGGCCGGTGCCGCATGTTGCTGTTGCGGGCCTC 5291 Query 213365 CTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGT 213424 || | |||||| |||| |||||||||| | |||||||| ||| | | || | || Sbjct 5292 TTCAACTGGGTAATGGTTGACGTCGATGATCCTATTGAGGTTACGGACGACAACCTGCGT 5351 Query 213425 GACATGGGCCAGGTACTCGTGATTGAACACGTAGC--CCCCGTCC----TGCACAAACTC 213478 || | | || | || | || |||||| ||| || | | ||||| | Sbjct 5352 CACCTCGTGGAGCTTCTGG------AAGTCGTAGCAGCCCTGTTCATAGTCGACAAAGGC 5405 Query 213479 AGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCAT 213538 ||||||||| | |||||| ||||| ||||| || || | || | | |||||| | Sbjct 5406 AGGCAGGGCTAGTGAGGCCAGATTGCAGACGGCGACTTCGTCAGGTGCCGAGTACTCGAC 5465 Query 213539 GATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACT-TTG 213597 ||| || ||||| ||||| | || |||||||||||||||| || || ||| ||| Sbjct 5466 GATTTCCGTGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTTTTGATT--ACTCTTG 5523 Query 213598 CGTTGGCAGAA-TCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGT 213656 || | |||| |||||||| ||||| |||| || || || ||| | |||| Sbjct 5524 CGGTTGCAGTGGTCCTTGTACAGCATAAAGGGATTGCCCGTTTCCGTCTGTGCTTCCAGG 5583 Query 213657 ATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTC 213715 || |||||| | | ||| ||| | || | || ||| | | || ||| Sbjct 5584 ATAGAATACCAGAGCTTCTGAGCCCGCACC----GTCTTGCGGCCACGGCCCTCGCGCTC 5639 Query 213716 GTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGA 213775 ||||| |||||| || | | ||||| | || || | |||| || || || Sbjct 5640 GTACTTTTCGTACAGAGCCTCAAATTCATCACCGTAGCAGTCGGCCAGGCCGGGGCATTC 5699 Query 213776 TGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTG-ACTCTCTGCATGAACAGGTCCG 213834 ||| |||||||| |||| || |||| | ||| || | || |||||||||||||| Sbjct 5700 GTTGGGGCACATGAGCGTCCAATCGCCGTTTT-TCTCCACGCGCTTCATGAACAGGTCCG 5758 Query 213835 GGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGC 213894 | | |||||| || ||| ||||| | || || ||| ||| ||| ||| |||| Sbjct 5759 GAATCCACAGGGCCAGGAAGAGGTCGCGGGCCCGAACCTCCTCCTTGCCATGGTTCTTGC 5818 Query 213895 GCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGC 213954 ||||||| ||||| ||||| | || |||||||||||||||| ||| ||||||||||| | Sbjct 5819 GCAGATCCAGAAACTCAAACACATCGGCGTGCCACGGCTCCAAGTATATGGCAAAGGCAC 5878 Query 213955 CCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGA 214011 | |||| | |||||||||||||| || | |||| ||||||||| || || | Sbjct 5879 CTGGCCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAGACACGAAGCA 5938 Query 214012 CGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA 214071 ||| | | ||||| || |||||||| || || || || || |||| || | | Sbjct 5939 TGGGAATGACACCGTTCGAAGTCCCGTTGGTGCCGGCAATGTAAGAACCGGTAGCACGGA 5998 Query 214072 --GGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCT 214129 | || || | |||||| ||||| ||||| |||||||||||||||||| | | Sbjct 5999 TCCGATG--CACGTTGAGCCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCATGTCTT 6056 Query 214130 CACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGA 214189 | || || |||||| | |||||||| || | | || | | |||||| ||| Sbjct 6057 GAGCGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGA 6116 Query 214190 GAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTT 214249 ||||| | | || ||| | |||||| ||||| || |||||| | | ||||| Sbjct 6117 AAGCTGACACTGAGGCGTGCCGGCGTTGAACAGCGTCGGCGACGCATGGGTGAAGAACTT 6176 Query 214250 GTTAGAGAGGAGCCTGTAGGTCTCCAGGACT 214280 | | || | ||| |||| ||||| |||||| Sbjct 6177 GCTGGACATGAGGTTGTACGTCTCGAGGACT 6207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931519048247040