Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1133 123 2e-22 seq598 114 8e-20 >seq1133 Length=6413 Score = 123 bits (136), Expect = 2e-22 Identities = 323/488 (66%), Gaps = 6/488 (1%) Strand=Plus/Minus Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||||||||||| ||||| || | || || || || | |||| | || || || Sbjct 5504 GACATCATTGCCAATGATCAAGGCAACCGGACTACTCCCTCCTTTGTTGCCTTCACCGAC 5445 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | || || || ||||| || || |||||| || || ||| ||| || Sbjct 5444 ACAGAGCGCCTGATCGGCGATGCCGCGAAGAATCAAGTGGCTATGAACCCTCATAACACC 5385 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 |||| ||||| || ||||||||||||| || ||| || | || || | || Sbjct 5384 GTTTTCGATGCGAAGCGATTGATTGGTCGCAAGTTTAGCGACGCTGAAGTTCAGGCCGAC 5325 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AA 474629 ||| |||| |||||||| | || | | || || || ||||||| | Sbjct 5324 ATGAAGCATTTCCCTTTTAAAATTATCGACAAAGCCGGCAAGCCTGTGATAGAAGTCGAG 5265 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | || ||| ||| | || |||| || | |||||||| ||||| || | | Sbjct 5264 TTCAAGGGGGAGAAG--AAAAATTTCACACCCGAGGAGATTTCTTCGATGGTGTTGACTA 5207 Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 | ||| | ||||| ||| | ||||| || || || |||| || || ||| Sbjct 5206 AGATGCGCGAGACCGCCGAGAGC-TATCTGGGTGGTACTGTTACCAATGCCGTCATCACT 5148 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 ||||| || || || ||||| ||||||||||| || || ||||| || || ||| Sbjct 5147 GTTCCTGCCTACTTCAATGACAGCCAACGTCAAGCCACCAAGGATGCCGGCCTTATCGCA 5088 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 ||||| |||||| | || || || || ||||| || || ||||| |||| || || || Sbjct 5087 GGTCTGAATGTTCTCCGCATCATCAACGAACCCACGGCGGCCGCTATTGCATACGGCCTG 5028 Query 474869 GATAAGAA 474876 || ||||| Sbjct 5027 GACAAGAA 5020 >seq598 Length=71582 Score = 114 bits (126), Expect = 8e-20 Identities = 161/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609 ||| || || || ||||| || | || |||||||| || ||||| || ||| |||| Sbjct 1627 ACGGAGGCGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATGTTATAGTC-GCTCAGAG 1569 Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669 | | |||||| ||||| ||||||||||| || || || ||||| || |||||||| | Sbjct 1568 TACGTCCATCTTCCAGTTGTTTTCCAGCAAATATGAGGCGCTGTTGGTCGGGAGGAATGC 1509 Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCA 480728 ||||||||||||| || || || || ||||| ||||| | | | || || || Sbjct 1508 CTTCCTTGTCTTGTATTTTCGACTTCACGTTGTCAATCGTATCCGAAGATTCAACTTCCA 1449 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | |||||| || || || || |||||||| || || ||||| Sbjct 1448 A-GGTAATCGTCTTTCCCGTCAGAGTCTTGACAAAGATTTG 1409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268128541179788