Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq677 185 1e-41 seq686 105 8e-18 >seq677 Length=7370 Score = 185 bits (204), Expect = 1e-41 Identities = 701/1086 (65%), Gaps = 37/1086 (3%) Strand=Plus/Minus Query 75524 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGG 75583 ||| | ||||| |||||||| || || ||| || || ||||| || | || | | || Sbjct 5951 GGTGTCATTCCCATGCTTCGTGTCTTCAACAATACGGCCCGCTACGTCGACCAGG-GCGG 5893 Query 75584 CGTC-----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGG 75638 | | || ||| | || | || | |||||||| || ||||| |||||| | | | Sbjct 5892 CAACAAGCGGCCAGGTG-CCTTTGCCATATACTTGGAGCCGTGGCACGCCGATGTGTTTG 5834 Query 75639 AGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTT 75698 |||| || || | || ||||| || | || |||| |||| | || ||||| Sbjct 5833 AGTTTCTGGATCTGCGCAAGAACCATGGCAAGGAGGAGGTTCGGGCCCGCGACCTCTTCC 5774 Query 75699 CATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTC 75758 ||||||||||||| ||||| ||||||||||| || ||| | || | ||| | | Sbjct 5773 TGGCCCTGTGGATTCCGGACCTGTTCATGAAGCGCGTGGAGAAAAACGGCGATTGGACGC 5714 Query 75759 TTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCC 75817 | | || || || || || || || || ||||| ||||| || ||||| || Sbjct 5713 TCATGTGCCCCAACGAATGCCCC-GGCCTGGCCGACTGCTACGGTGATGAATTTGAGGCT 5655 Query 75818 CTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT 75877 || ||| |||||| || ||||| | | | ||| || | || | || | | Sbjct 5654 CTGTACGAAAAGTACGAGCGCGAGGGCCGTGGCCGCAAGACGGTGCGGGCT-CAGAAGCT 5596 Query 75878 -TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGA 75936 ||| | |||| || || |||||||||| || || | || | |||||| |||||||| Sbjct 5595 CTGGTATTCTATCCTGGAAGCACAGACGGAAACGGGCAATCCCTTTATGCTGTACAAGGA 5536 Query 75937 TGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTG 75996 || ||| |||||||| |||||||| |||| || || ||| || || ||||| Sbjct 5535 CCACTGCAACCGCAAGAGTAATCAAAAGAACCTGGGCACCATTCGGAGTTCGAACCTTTG 5476 Query 75997 CACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAAT 76056 ||||||||| | |||||| | | || || || || |||||| |||| ||| | Sbjct 5475 CACGGAAATCGTCGAGTACTCGGCACCTGACGAAGTCGCCGTCTGCAATCTGGCCTCACT 5416 Query 76057 CGCCCTTCCAAAGTATGT---CAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCA 76113 ||||| || | ||| | ||||| || || | || | | || || || Sbjct 5415 AGCCCTGCCTGCCTTTGTCGACTATGAACAG---GGCTGCTACGACTTCCAGAAGCTCCA 5359 Query 76114 TGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCC 76173 || | || || |||| | || || || | |||| ||| || ||| || Sbjct 5358 CGAGGTGACGCAGGTTGTCGTCCGTAACCTCAATAGGATCATCGACGTCAACCATTACCC 5299 Query 76174 CGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGG 76233 ||||| || || || || ||||| ||| | || |||||| ||||||| || || Sbjct 5298 AGTTGAAGAGGCCCGCAACAGCAACATGCGGCACCGGCCGATTGGTGTGGGTGTCCAGGG 5239 Query 76234 TCTCGCGGATGTATTTATTTTGTGCCGCTACGCA-----TTTGATTCAGATGAAGCCAAG 76288 || || |||| |||| || | || |||| ||||| || || ||| | Sbjct 5238 CCTGGCCGATG-----CTTTTCTGGCTCTCCGCATGCCGTTTGAGTCTCCGGAGGCCCGG 5184 Query 76289 GAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTG-GAGGCGAGTTGTGA 76347 ||| | || | ||||| |||||||| || ||||| || || | | | | || || Sbjct 5183 GAGCTAAACCAGCAAATCTTCGAAACCATCTACCACGCCGCCTTGAGTGCCTCGATG-GA 5125 Query 76348 ATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGT 76407 |||| | | |||| |||| | | ||| |||| || || ||||| | || || Sbjct 5124 GCTGGCCAAGAGCGAAGGGCCCTACTCGTCGTTTAAGGGATCGCCGGCGTCGGAGGGCGT 5065 Query 76408 GCTTCAGTTTGATATGTGGGAAGGTGAAACC----AAGCTCAACTACGACTGGGATGTTC 76463 ||| |||||||| |||| |||||||||| || |||| || || ||||| | Sbjct 5064 GCTCCAGTTTGACATGT-GGAAGGTGAAGCCTTCAGAGCT---CTGGGAGTGGGAAACGC 5009 Query 76464 TCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 76523 | ||| | ||||||||| | || | || |||||||| || | || || ||||| | Sbjct 5008 TACGGGAGCAGATCAAGGAGCATGGCATACGCAACAGTCTGCTGGTAGCCCCCATGCCGA 4949 Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583 | ||| ||| | || ||| | || ||||| || ||||| || || ||||| | |||| Sbjct 4948 CGGCCAGCACGTCGCAGATCCTCGGCAATAACGAGTGCTTCGAGCCTTACACGTCCAACA 4889 Query 76584 TCTACC 76589 | |||| Sbjct 4888 TTTACC 4883 >seq686 Length=19048 Score = 105 bits (116), Expect = 8e-18 Identities = 219/320 (68%), Gaps = 7/320 (2%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 |||||||||||||| || || || ||||||| || |||||| ||||| ||||| ||| Sbjct 9049 GGTGCCAAGATCCCGCGTGGTGCTATTCTCGCCGGACCGCCAGGCACGGGCAAGACACTC 8990 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTG-CTCTGCCGCAAA 175394 || ||| |||| || || || ||| ||| | || | ||| | | || | | Sbjct 8989 CTAGCCAAGGCCACGGCTGGAGAGTCAGGGGTCGCCTT-TTTCAGCGTCAGTGGGTCCGA 8931 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 ||| ||||||||||||| ||||||||| | || || ||||| | || | | | Sbjct 8930 GTTTATGGAGATGTTTGTGGGTGTGGGTTCGTCCAGAGTACGCGACTTGTTCGCAGAGGG 8871 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG-CAAC 175513 ||| | ||| || ||||| ||||||| ||||||||||| || | |||||| | | Sbjct 8870 TCGCAAGAATGCTCCTTGTATAATCTTCATCGATGAGATTGACGCTATTGGCAAGTCCAG 8811 Query 175514 G---CAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTAC 175570 | || || || | ||| ||| || || || |||| ||| | |||||| | | Sbjct 8810 GGTACAAGGCCGGGGCTAT-ACAGGCAACGAGGAACGAGAGGCCACACTGAATCAAATCC 8752 Query 175571 TCACCGAGATGGATGGCTTT 175590 | |||| |||||||||||| Sbjct 8751 TTGCCGAAATGGATGGCTTT 8732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596560793141280