Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq598 96.9 5e-15 >seq598 Length=71582 Score = 96.9 bits (106), Expect = 5e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || |||| ||||| || ||||| || ||||| ||| ||| Sbjct 1406 ATGCAAATCTTTGTCAAGACTCTGACGGGAAAGACGATTACCTTGGAAGTTGAATCTTCG 1465 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| |||||||| ||||||||||| || |||||||| ||||| || ||| Sbjct 1466 GATACGATTGACAACGTGAAGTCGAAAATACAAGACAAGGAAGGCATTCCTCCCGACCAA 1525 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || | | || | ||| || || || || |||||| Sbjct 1526 CAGCGCCTCATATTTGCTGGAAAACAACTGGAAGAT 1561 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||||||||| | || || |||||||| || || || || | ||||||||| || Sbjct 950 ATGCAAATATTCGTCAAGACGTTGACTGGCAAGACGATCACTCTGGAAGTCGAATCGTCC 1009 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || || ||||| || || || || || || ||||| || || || ||| Sbjct 1010 GACACCATCGATAATGTGAAGTCAAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAA 1069 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | |||| | ||| |||||||||||||| ||| ||||| | || || || ||| Sbjct 1070 CAGCGCCTGATCTTTGCTGGTAAGCAGCTCGAGGATGGTCGAACTCTGTCCGACTACAAT 1129 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || |||||| | ||| | ||| Sbjct 1130 ATTCAGAAAGAGTCCACGTTGCAT 1153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731861195739600