Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq780 118 3e-21 >seq780 Length=34333 Score = 118 bits (130), Expect = 3e-21 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496 ||||||| ||| || ||| | |||||||||||| |||||||||||||| || Sbjct 30422 TTCCTTGCATTCGCAAAAAAGCCGACTGGGCTATTCGCTGGATCCAGGACAAAAACTCGT 30481 Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556 |||||| || | || || ||||||| || |||||||| || ||||||||||| | Sbjct 30482 CGTTTGCTCAACGCTTGGTAGCCTTTGCTGCGGTCGAGGGCATCTTCTTCAGTGGTGCCT 30541 Query 133557 TCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACG 133616 | ||| || || ||||| || || ||||| | | ||||| || ||||| |||| Sbjct 30542 TTGCCTCCATCTTCTGGCTCAAGAAACGTGGCCTAATGCCTGGCTTGACCTTTTCCAACG 30601 Query 133617 AACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTC 133671 |||| ||||| | || |||| | ||||| || |||||| | | || ||||| Sbjct 30602 AACTCATTTCGCGAGATGAGGGTTTGCACACGGATTTTGCCTGTCTCCTACACTC 30656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471795329099997