Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq677 170 3e-36 seq1050 123 4e-22 seq709 114 2e-19 seq780 100 5e-15 seq113 96.9 5e-14 seq475 95.1 2e-13 seq568 91.5 2e-12 >seq677 Length=7370 Score = 170 bits (188), Expect = 3e-36 Identities = 346/511 (68%), Gaps = 21/511 (4%) Strand=Plus/Plus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || ||||||||| ||||| ||||| | ||| ||||| || |||||||| | | ||||| Sbjct 5895 GCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAGACACGAAGCATGGGAATGACACCGTT 5954 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 || ||||||||||| || | ||| | || | || || | | ||| || | Sbjct 5955 CGAAGTCCCGTTGGTGCCGGCAATGTAAGAACCGGTAGCACGGATCCGATGCACGTTGAG 6014 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 ||||||||||||||| ||||||||| | ||||| | || ||||| ||||||||||| Sbjct 6015 CCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCATGTCTTGAGCGTGTCGTAGATGCC 6074 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 |||||| ||| |||||||||| | || ||||||||||| || | | ||| Sbjct 6075 CTCGATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGAAAGCTGACACTGAGGCGT 6134 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836 |||||| ||||| ||||| |||| ||| ||| | ||| ||||||| | ||| Sbjct 6135 GCCGGCGTTGAACAGCGTCGGCGACGCATGGGTGAAGAACTTGCTGGACATGAGGTTGTA 6194 Query 2073837 GGTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGC 2073896 || |||| || || | | | ||| | || |||||| || | ||| Sbjct 6195 CGTCTCGAGGACTCGGTCGA-----TATTG-----CCGC---CCCATA--TACCCACGGC 6239 Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTCGACGA---CGGCGTCGCGCACCTTGGTCAG 2073953 |||||||||||||||| || || ||||| |||| | ||||| | |||| || Sbjct 6240 AACGCGCATGATCATGTGTTGAGGGCGCTCAACGATCTTGCCGTCG---AGCTTGAGCAA 6296 Query 2073954 GTAGGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCG 2074013 || || || ||| ||| | |||||| ||| |||| | ||| || || | | Sbjct 6297 ATAAGAACGTTCCAGTGTCTTGAAGCCAAAATACTGGTAGTTAAAGTCCCGGTCATAGAT 6356 Query 2074014 GATGGCGGCGTCGAGGGCCTCCTTGTGCGCC 2074044 |||||| | |||||| |||||||||||| Sbjct 6357 GATGGCCGAGTCGAGCCTATCCTTGTGCGCC 6387 Score = 122 bits (134), Expect = 1e-21 Identities = 174/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 2071768 AGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAG 2071827 || || ||||| | | |||| ||| ||| ||||||||| ||| ||||| | | Sbjct 5653 AGAGCCTCAAATTCATCACCGTAGCAGTCGGCCAGGCCGGGGCATTCGTTGGGGCACATG 5712 Query 2071828 AGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCG 2071887 |||| ||| |||||| || ||||||| ||| |||||||| |||||||| | Sbjct 5713 AGCGTCCAATCGCCGTTTTTCTCCACGCGCTTCATGAACAGGTCCGGAATCCACAGGGCC 5772 Query 2071888 TAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAG 2071947 ||||| ||||| ||||| |||||||||||| |||||||| ||| || || | Sbjct 5773 AGGAAGAGGTCGCGGGCCCGAACCTCCTCCTTGCCATGGTTCTTGCGCAGATCCAGAAAC 5832 Query 2071948 TCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCG 2072007 || | | ||||||||||||||||||| ||| ||||||||| || |||||| | Sbjct 5833 TCAAACACATCGGCGTGCCACGGCTCCAAGTATATGGCAAAGGCACCTGGCCGCTTGTTG 5892 Query 2072008 CCGCC 2072012 ||||| Sbjct 5893 CCGCC 5897 Score = 95.1 bits (104), Expect = 2e-13 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGA 2069662 |||||||||| || ||||||| |||||||| ||| ||| |||||| |||| Sbjct 4844 GGTTGACCACCTGGAACTCGCCCGCCAGCACGCGTCGCTGGTAAATGTTGGACGTGTAAG 4903 Query 2069663 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 2069722 |||| | |||| | ||||| |||||||||||||| ||||||| |||||| | || | Sbjct 4904 GCTCGAAGCACTCGTTATTGCCGAGGATCTGCGACGTGCTGGCCGTCGGCATGGGGGCTA 4963 Query 2069723 CGAGCAGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTCCC 2069782 | ||||| |||||| | ||| | || | | || |||| || | ||||| |||| Sbjct 4964 CCAGCAGACTGTTGCGTATGCCATGCTCCTTGATCTGCTCCCGTAGCGTTTCCCACTCCC 5023 Query 2069783 AG 2069784 || Sbjct 5024 AG 5025 >seq1050 Length=13000 Score = 123 bits (136), Expect = 4e-22 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || |||||||||||||| || || |||||||||| |||||| |||||| ||| Sbjct 9806 TGTATTTCGTGACGGCCTTGGTCCCTTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGCA 9747 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || |||||||||||||| || || || || || |||||||| | Sbjct 9746 ACAGAAGACGGACGGCGGTCTGGATTTCCCGACTGGTAATGGTAGAACGCTTGTTGTAGT 9687 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| |||| | |||| | ||||||| |||| ||||||||||| || ||||| Sbjct 9686 GGGCCAGACGGCTAGATTCGGCGGCGATGCGTTCGAAAATGTCGTTGACGAAGCTGTTCA 9627 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | || || | || ||||| || || ||||| | |||||||| Sbjct 9626 TGATGCTCATGGCCTTCGACGACACTCCGGTATCGGGATGTACTTGCTTCAACACCTTGT 9567 Query 1485710 AAA 1485712 ||| Sbjct 9566 AAA 9564 >seq709 Length=10900 Score = 114 bits (126), Expect = 2e-19 Identities = 173/246 (70%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 |||||||| ||| | |||||| | |||| || ||||||||||| || | || || | Sbjct 6617 CTGCCGCCTGGCAGACACAAGCTCGTCATTCTAGATGAGGCCGATAGCATGACCTCAGGC 6558 Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314 || |||||||| || ||| |||||||| | ||| | ||||||||| | || || | Sbjct 6557 GCGCAGCAGGCACTGCGACGCACCATGGAGATTTACTCAAACACGACGAGATTCGCCTTT 6498 Query 2019315 GCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGC 2019374 |||||||| ||| | | ||||||| | |||||| || || |||||| | || Sbjct 6497 GCCTGCAATCAGTCCAACAAGATCATCGAGCCACTCCAGTCTCGATGTGCCATCCTCCGA 6438 Query 2019375 TTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAA 2019434 | ||| |||||||| | |||| | | | |||||||| | || || || || ||| Sbjct 6437 TATGCCAAGCTCACCGATGGCCAGGTGGTCAAGCGTCTGCTACAAATCATTGAGGCGGAA 6378 Query 2019435 AAGGTC 2019440 |||||| Sbjct 6377 AAGGTC 6372 >seq780 Length=34333 Score = 100 bits (110), Expect = 5e-15 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 793926 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCC 793985 || |||||||||||||||||| | ||||| || ||||| | || ||||| | | Sbjct 30911 TCAAAAAAGTTGGTCTTGCCCCCTAGCGATATGTTTTCCATGAAATCAAAGGGGTTCGAC 30852 Query 793986 GTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATG 794045 | | ||| ||| ||| || || | | || ||||||||||| ||||| || || Sbjct 30851 GACCTGTACACCTTTTCGTTGCCCAGGGCGACTAGAAGGCGGTCGGCAACGAACTCGATA 30792 Query 794046 TACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA 794105 ||||| ||| | || |||||||||||||| | || |||||| | ||| ||| | Sbjct 30791 TACTGCTTCATCAAGGTGGCGTTCATGCCGAGTAATGCGCAGGGCAGGGCTTCGGTGAGA 30732 Query 794106 AACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 || |||| ||||| |||||| ||| ||||||| Sbjct 30731 AATTCTTGTTCGATGGTGACGGCATCGGTGATGAT 30697 >seq113 Length=64593 Score = 96.9 bits (106), Expect = 5e-14 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 429518 CGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCC 429577 |||||||| ||||| |||||| || ||| || | | || | ||||| || || Sbjct 23020 CGGGTGGAAAGTCGAACGCCACTTGATGGACGGTGATTACATTGTATTCAACCGCCAACC 22961 Query 429578 GTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGGTCGCACCTT 429637 |||||| |||| || ||| ||| | || || |||||| ||| || Sbjct 22960 GTCGCTTCACAAGGAGTCCATGATGGGGCATTGCGTCCGCGTCATGCCTTACTCCACTTT 22901 Query 429638 CCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAA 429697 ||| |||||||| |||| || |||||||||| ||||||||||||||||||||||| Sbjct 22900 CCGCCTCAACCTCTCCGTCACCTCGCCCTACAACGCAGACTTTGACGGCGACGAGATGAA 22841 Query 429698 CCTGCACGTGCCCCAG 429713 | |||||||||||||| Sbjct 22840 CTTGCACGTGCCCCAG 22825 Score = 87.8 bits (96), Expect = 3e-11 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 434136 TTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACACCATGTGCTGT 434195 ||||| ||| | ||||||||| | || ||| ||||||| || ||| |||| || Sbjct 20211 TTTGATGGCTCATACGTCAACCATCGGCACATTGCGCTACTGACAGACGTCATGACCTAC 20152 Query 434196 CGCGGCTCGGTGGTGGCCGTCACGCGGCACGGCTTCAACCGGGCCGACCACGGCTTTCTG 434255 |||||| | | ||| || ||||||||||| |||||||||||||| ||| || Sbjct 20151 CGCGGCACTATCTCGGCGGTGACGCGGCACGGAATCAACCGGGCCGACACGGGCGCGCTC 20092 Query 434256 TCGCGGGCCTCCTTTGAGGAGACTGTCGACATCCTCTTTGACGCGGCGGCC 434306 ||| || || |||||||| ||||| |||||| | || || |||||| Sbjct 20091 ATGCGCTGTTCATTCGAGGAGACGGTCGAGATCCTCCTCGAGGCCGCGGCC 20041 >seq475 Length=99312 Score = 95.1 bits (104), Expect = 2e-13 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710 ||||||| || || |||||| || | || || | |||||||||||||| |||||| | | Sbjct 72792 CCAACTATCTTGATATCAAGTCCTTACTTGACGTTGGGTGCAAGACCGTTGCCAACATGA 72733 Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 ||||||||||||| || || || || || ||||| || ||||||| Sbjct 72732 TCAAGGGCAAGTCTCCGGAAGAGATTCGAAAGACGTTCAACATCA 72688 >seq568 Length=17807 Score = 91.5 bits (100), Expect = 2e-12 Identities = 97/123 (79%), Gaps = 4/123 (3%) Strand=Plus/Plus Query 2233090 GGTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCG-TCAGACGAGG 2233148 ||| || |||||||||||||| ||||| || ||||| ||||||||| || ||| ||| | Sbjct 17403 GGTGGCATTTCCCACCGAGACAGTCTACGGGCTCGGGGCCGACGCGACGCGCAG-CGATG 17461 Query 2233149 CCGTACAGCG-CATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCAC 2233207 |||| | ||| ||| | | || |||||| || ||| | |||| ||| ||||||||||| Sbjct 17462 CCGTGC-GCGCCATATATCGCGTCAAGGGTCGGCCGGCGGACAATCCGCTCATCGTGCAC 17520 Query 2233208 GTG 2233210 ||| Sbjct 17521 GTG 17523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916120771643459