Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1133 140 2e-27 >seq1133 Length=6413 Score = 140 bits (154), Expect = 2e-27 Identities = 913/1454 (63%), Gaps = 31/1454 (2%) Strand=Plus/Plus Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 || ||||| ||| || ||||| ||| || || ||| | || | ||||| | Sbjct 4066 TTGGTAATGACAATCTTATTGGACTTGCCGGTGCCCTTTTCAACTGCCGAAACATTCATG 4125 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || || || || || | |||||| ||||| ||||| || || || || | | ||||| Sbjct 4126 ATGCCGTTAGCGTCAACATCAAACGTGACCTCAATCTGGGGAACACCGCGAGGCGCAGGC 4185 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| || | | |||| | || || |||||| || || ||| | ||||| Sbjct 4186 GGGATGCCGGTGAGCTCAAATTTGCCGAGTAGATTATTGTCCTTGGTGCGCTGGCGTTCG 4245 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 |||||| | | |||||| || ||| |||||| || ||| | || | || || | Sbjct 4246 CCCTCGTACACCTGGATAAGGACACCAGGTTGATTGTCGGAAAATGTGGAGAAGACCTCG 4305 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 || || || ||||| || ||||| | ||| | |||||||| || || ||||| Sbjct 4306 GACTTCTTGGTGGGAATGGTGGTGTTGCGCGGAATCAGCTTGGTCATCATGCCGCCAGCA 4365 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 281738 || || | ||| || || | || | |||||| | || | ||| | || | | || Sbjct 4366 GTCTCAATACCGAGGGACAAGGGGGCGACATCCAGTAACAGAATCTCGTTGGTCGACTTG 4425 Query 281739 CATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 | | || | ||| | ||| || || || | || ||||| || ||||| || || Sbjct 4426 GACGAAGTATCTCCAGATAAAATGGCAGCCTGGACGGCTGCACCGTAGGCAACGGCCTCG 4485 Query 281798 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT- 281856 || || || | | | || | | ||||| ||||| | | | || || | ||| Sbjct 4486 TCGGGGTTGATCGACTTGTTGGGCTCCTTACCGTTGAAGTAGTCGGTAATGAGCT-TCTG 4544 Query 281857 --TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 281914 ||| ||||| || | || || || || | ||||| || || || || || Sbjct 4545 GATACGG--GGAATCCGTGTAGAGCCACCGACGAGGACAATCTCGTGGACTTGGCTCTTG 4602 Query 281915 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCT 281974 || | || | |||| | || || || || | || | | ||||| ||| Sbjct 4603 TCAATCTTGGCATCCGCAAGGACGCGGTCGACTGGCTGAATGGTTGAGCGGAACAAATCT 4662 Query 281975 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGTGACATTATAATCAATTCCTTCG 282031 ||||| || || || ||| | |||| |||| | ||||||| || ||| Sbjct 4663 TGGCAAAGCTCCTCAAAGCGAGCACGGGTAATGGAAGTG---TAGAAATCAATACCCTCG 4719 Query 282032 AACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGT 282091 |||| ||| || | ||||||| || || | ||| ||||| |||| || || || || Sbjct 4720 AACAGAGAGTCGATCTCAATCGAGGTCTGGGCCGAGGAAGACAGTGTGCGCTTGGCTCGC 4779 Query 282092 TCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT-CAAATCTGTTTTATA 282150 || || || || | || | |||| ||| |||| | || |||||| | || | Sbjct 4780 TCGCAGGCAGTGCGAAGCCGGCGTAGGGCACG-GCTGTTCGAGGACAAATCCTTCTTGTG 4838 Query 282151 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 282210 || | |||||| || | ||| | | || | || || || ||||| ||||| || Sbjct 4839 CTTGCGCTTGAATTCATTCACAAAGTGGTTGACCAAGCGGTTGTCGAAATCCTCACCGCC 4898 Query 282211 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 282270 | | || | || | || | | |||| ||||| ||| || || | | | || Sbjct 4899 AAGATGGGTGTCGCCAGCGGTCGACTTGACTTCGAAAATTCCCTCCTCGATGGTTAGGAG 4958 Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330 | |||||| ||| |||||||||| |||||||| || || || || || Sbjct 4959 GGAGACATCAAAGGTACCACCACCCAAGTCAAAAATGAGGACGTTGCGCTCGCCCTCCAC 5018 Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390 || || || || || || |||| ||| || || || ||||| || || || | | ||| Sbjct 5019 CTTCTTGTCCAGGCCGTATGCAATAGCGGCCGCCGTGGGTTCGTTGATGATGCGGAGAAC 5078 Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 ||| ||||| || || || ||||| || |||||||| | ||| || || || || Sbjct 5079 ATTCAGACCTGCGATAAGGCCGGCATCCTTGGTGGCTTGACGTTGGCTGTCATTGAAGTA 5138 Query 282451 TGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCT-TGCTGTTT 282509 ||||||||||| || ||||||| || || || | || ||| || || || | Sbjct 5139 GGCAGGAACAGTGATGACGGCATTGGTAACAGTACCACCCAGAT-AGCTCTCGGCGGTCT 5197 Query 282510 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG---AATATTGCTTGGATT 282566 ||| ||| | || | ||| || ||||| | || || | ||| || ||| | Sbjct 5198 CGCGCATCTTAGTCAACACCATCGAAGAAATCTCCTCGGGTGTGAAATTTTTCTT--CTC 5255 Query 282567 CATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT---AATAACTTTAAATG 282623 | |||| | ||||| | || || || | || |||| |||||| | Sbjct 5256 CCCCTTGA-ACTCGACTTCTATCACAGG---CTTGCCGGCTTTGTCGATAATTTTAAAAG 5311 Query 282624 GCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTT 282683 | ||| ||||| || | ||||| ||| |||| | | |||||| ||||| | Sbjct 5312 GGAAATGCTTCATGTCGGCCTGAACTTCAGCGTCGCTAAACTTGCGACCAATCAATCGCT 5371 Query 282684 TTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAA 282743 | ||||| |||| || || || || | || |||||| || || ||||| || | Sbjct 5372 TCGCATCGAAAACGGTGTTATGAGGGTTCATAGCCACTTGATTCTTCGCGGCATCGCCGA 5431 Query 282744 TCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCAT 282803 |||| | ||||| || || || | |||| | || ||||| || || || |||||||||| Sbjct 5432 TCAGGCGCTCTGTGTCGGTGAAGGCAACAAAGGAGGGAGTAGTCCGGTTGCCTTGATCAT 5491 Query 282804 TCGCAATAATTTCA 282817 | ||||| || ||| Sbjct 5492 TGGCAATGATGTCA 5505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740572417890906