Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq677 174 2e-37
seq780 123 4e-22
seq1050 109 8e-18
>seq677
Length=7370
Score = 174 bits (192), Expect = 2e-37
Identities = 216/293 (74%), Gaps = 2/293 (1%)
Strand=Plus/Minus
Query 259894 CATGTCGCAGCA-GTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952
|||||| ||||| ||| |||||| ||| |||| ||||| || || ||||||||||| |
Sbjct 6186 CATGTC-CAGCAAGTTCTTCACCCATGCGTCGCCGACGCTGTTCAACGCCGGCACGCCTC 6128
Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012
||| |||||||||||| || | |||||||||| || |||||||||||||
Sbjct 6127 AGTGTCAGCTTTCGTCGTGCTTCCTCGTTGACATGAAGGAGGACAGCATCGAGGGCATCT 6068
Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072
| |||||||||||| ||||| | ||||||||| ||||||||||||||| | ||
Sbjct 6067 ACGACACGCTCAAGACATGCGCCATGATCTCCAAGATGGCCGGCGGCATCGGGCTCAACG 6008
Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132
|| | | || || | || | ||| | || ||||||||||| || |||||
Sbjct 6007 TGCATCGGATCCGTGCTACCGGTTCTTACATTGCCGGCACCAACGGGACTTCGAACGGTG 5948
Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185
| | ||||||||||| || || ||| | ||||| ||||||||||||||| ||
Sbjct 5947 TCATTCCCATGCTTCGTGTCTTCAACAATACGGCCCGCTACGTCGACCAGGGC 5895
Score = 122 bits (134), Expect = 1e-21
Identities = 356/541 (66%), Gaps = 18/541 (3%)
Strand=Plus/Minus
Query 262878 CTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACTCGTTGC 262936
|||||| ||||| | || |||| | | | || | |||||||| | |||||| |||
Sbjct 5025 CTGGGAGTGGGAAACGCTACGGGAG-CAGATCAAGGAGCATGGCATACGCAACAGTCTGC 4967
Query 262937 TCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCG 262996
| || || | |||||| ||||||| |||||||||||||| ||||| | |||| ||||
Sbjct 4966 TGGTAGCCCCCATGCCGACGGCCAGCACGTCGCAGATCCTCGGCAATAACGAGTGCTTCG 4907
Query 262997 AGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCA 263056
|| |||| |||||| ||| ||| |||||||| ||||||| || |||||||
Sbjct 4906 AGCCTTACACGTCCAACATTTACCAGCGACGCGTGCTGGCGGGCGAGTTCCAGGTGGTCA 4847
Query 263057 ACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACG--CCCGACTTTCGCGA 263114
||| | ||| ||||| | |||| | ||| | ||| || | ||| | |
Sbjct 4846 ACCCCTGGCTGCTCAAGGACCTGGTTGACTTGGGCTTATGGTCGGACTCGA--TGAAAAA 4789
Query 263115 CCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGA 263174
||| ||||||||| | | || || | ||| | | | || | || | ||
Sbjct 4788 CCGAATCATTGCGGAAAACGGGTCCATCCAGAACATCCCCAAC------ATCCCTGCTGA 4735
Query 263175 TCTCAAGGCTCTCTTCAAGACCGTGTGGGAG-GTGCCCAAC--CGGGTGACCATTGATAT 263231
||||||| || | |||||| || |||||| | | || | | |||| | | ||
Sbjct 4734 CGTCAAGGCACTTTACAAGACGGTCTGGGAGATTTCGCAGCGACAGGTG---GTGCAGAT 4678
Query 263232 GGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGA 263291
|||||||||||||| ||| | |||||||| ||||||||||||| | || | ||
Sbjct 4677 GGCGGCCGACCGCGGTGCCTTTATCGACCAGTCCCAGTCGCTCAACATCCACATGAAAGA 4618
Query 263292 CCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGAC 263351
|||| || | | ||||| ||||| || ||| | || ||||| ||
Sbjct 4617 CCCGTCGATGGGCAAAATCACCAGCATGCATTTTACTGGCTGGAAGCTGGGGCTCAAAAC 4558
Query 263352 TGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGATCA 263411
||||||||||| ||||| || | | | || || |||| || ||||| || || ||
Sbjct 4557 CGGCATGTACTACCTGCGTACGCAGGCGGCGGCGGCGCCCATCCAGTTCACGGTAGACCA 4498
Query 263412 G 263412
|
Sbjct 4497 G 4497
>seq780
Length=34333
Score = 123 bits (136), Expect = 4e-22
Identities = 208/296 (70%), Gaps = 5/296 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||| ||||||||||||||||| |||||||| |||| |
Sbjct 30016 GATTTGGCAAATGTAC-AAGAAGGCAGAGGCCTCCTTTTGGACAGCCGAGGAAATCGATC 30074
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891
|| | ||| | | ||||| ||| ||| || ||||| | || |
Sbjct 30075 TCTCCAAGGACTTGCACGACTGGAACAACCGCCTGAATGATGACGAAAAGTACTTTGTTT 30134
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||| |||| ||||||||| |||||| || |||||||| ||| ||| ||| |
Sbjct 30135 CCCACATCCTGGCCTTTTTT-GCCGCCTCGGACGGCATCGTCAACGAAAACTTGGTTGAG 30193
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
|| || | ||||| || | || ||||| |||| || ||||| || ||||||
Sbjct 30194 CGGTTCAGCGGCGAGGTTCAGATCCCCGAGGCCCGTTGCTTCTACGGATTTCAGATCATG 30253
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| || ||||||||||| || || ||||| ||||||||||| || || |||||||
Sbjct 30254 ATGGAGAACATCCACTCCGAGACATACTCCCTCCTGATCGATACATATATCAAGGA 30309
Score = 93.3 bits (102), Expect = 6e-13
Identities = 179/259 (69%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| ||| |||||| ||||| |||| ||| ||| ||| | ||||| ||
Sbjct 30697 ATCATCACCGATGCCGTCACCATCGAACAAGAATTTCTCACCGAAGCCCTGCCCTGCGCA 30756
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
| ||||||||||||||||| | ||| ||||| || | | || || ||||||||||
Sbjct 30757 TTACTCGGCATGAACGCCACC-TTGATGAAGCAGTATATCG-AGTTCGTTGCCGACCGCC 30814
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| || | || || ||| | || ||| ||| || || | ||||| || | |||
Sbjct 30815 TTCTAGTCGCCCTGGGCAAC-GAAAAGGTGTACAGGTCGTCGAACCCCTTTGATTTCATG 30873
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
|| || ||||| | |||||||||||||||||| || || || || || |||
Sbjct 30874 GAAAACATATCGCTAGGGGGCAAGACCAACTTTTTTGAAAAACGGGTCGGTGACTACCAG 30933
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
|||||||| |||| ||||
Sbjct 30934 AAGGCCGGTGTCATGGCCA 30952
>seq1050
Length=13000
Score = 109 bits (120), Expect = 8e-18
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|| ||||||||| | ||||| || || ||| |||| | | | || ||| ||
Sbjct 9563 ATTTACAAGGTGTTGAAGCAAGTACATCCCGATACCGGAGTGTCGTCG------AAGGCC 9616
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| ||||||||| || ||||||||||| |||| ||||||| | |||| | |
Sbjct 9617 ATGAGCATCATGAACAGCTTCGTCAACGACATTTTCGAACGCATCGCCGCCGAATCTAGC 9676
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| ||||| | || ||||||||| || || || || || ||||||||||||||
Sbjct 9677 CGTCTGGCCCACTACAACAAGCGTTCTACCATTACCAGTCGGGAAATCCAGACCGCCGTC 9736
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| || | ||| |||||| |||||| |||||||||| ||| || ||||
Sbjct 9737 CGTCTTCTGTTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGCGAAGGGACCA 9788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177697290379322
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |