Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq598 134 1e-26 seq574 104 2e-17 seq1010 93.3 4e-14 >seq598 Length=71582 Score = 134 bits (148), Expect = 1e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 35533 ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTG 35592 ||| ||||| ||| || ||||| ||||| |||| || ||||| | || || ||||| Sbjct 1153 ATGCAACGTGGACTCTTTCTGAATATTGTAGTCGGACAGAGTTCGACCATCCTCGAGCTG 1094 Query 35593 CTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 |||||| ||||| |||| ||||| || |||| |||| || |||||||||| ||||| Sbjct 1093 CTTACCAGCAAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 1034 Query 35653 TTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | ||||| | | | | |||||| |||||| || |||| |||||||| || || || Sbjct 1033 TGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAGAGTGATCGTCTTGCCAGT 974 Query 35713 CAAAGTTTTCACAAATATCTGCAT 35736 ||| || || || ||||| ||||| Sbjct 973 CAACGTCTTGACGAATATTTGCAT 950 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | | ||| || | || || || || || || || || Sbjct 1369 CTCTTTCTGGATGTTGTAGTCAGAGAGGGTCCGGCCATCCTCAAGTTGTTTTCCAGCGAA 1310 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | ||| | || |||||| ||| ||||| ||| | || Sbjct 1309 TATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTGA-CGT 1251 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| |||||| || |||| ||| ||||| || || || || || || | Sbjct 1250 TGTCGATGGTGTCGGACGATTCGACTTCCAACGTAATCGTCTTGCCGGTTAATGTCTTGA 1191 Query 35724 CAAATATCTGCAT 35736 | || || ||||| Sbjct 1190 CGAAGATTTGCAT 1178 >seq574 Length=30825 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || |||||||| ||| || |||||| | || || |||||||| || Sbjct 26599 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCATGGTTCGGCCATCTTCGAGCTGCTTTCCG 26658 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| || | ||||||||||| | |||| || |||||| ||| ||||| ||| Sbjct 26659 GCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGAATCTTGGACTTG 26718 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | ||||| || |||||||| | ||||| || || ||||| | ||| Sbjct 26719 ACGTTATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGTGAGGGTT 26778 Query 35720 TTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 26779 TTGACGAAGATCTGCAT 26795 >seq1010 Length=27177 Score = 93.3 bits (102), Expect = 4e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 ||||||| ||||||||||||| || ||||| |||| || |||||||| || || || | Sbjct 25515 CCTTTTGGATGTTGTAATCGGACAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 25574 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| || || || |||| ||||| || |||||| ||| ||||| || | | | Sbjct 25575 TCAGTCGTTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAATCTTGGATTTGACATTAT 25634 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | |||||| ||| || ||||| | ||||| || || ||||| Sbjct 25635 CGATCGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 25680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450786945159480