Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq598 134 1e-26
seq574 104 2e-17
seq1010 93.3 4e-14
>seq598
Length=71582
Score = 134 bits (148), Expect = 1e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 35533 ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTG 35592
||| ||||| ||| || ||||| ||||| |||| || ||||| | || || |||||
Sbjct 1153 ATGCAACGTGGACTCTTTCTGAATATTGTAGTCGGACAGAGTTCGACCATCCTCGAGCTG 1094
Query 35593 CTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652
|||||| ||||| |||| ||||| || |||| |||| || |||||||||| |||||
Sbjct 1093 CTTACCAGCAAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 1034
Query 35653 TTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| ||||| | | | | |||||| |||||| || |||| |||||||| || || ||
Sbjct 1033 TGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAGAGTGATCGTCTTGCCAGT 974
Query 35713 CAAAGTTTTCACAAATATCTGCAT 35736
||| || || || ||||| |||||
Sbjct 973 CAACGTCTTGACGAATATTTGCAT 950
Score = 89.7 bits (98), Expect = 5e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| || | | ||| || | || || || || || || || ||
Sbjct 1369 CTCTTTCTGGATGTTGTAGTCAGAGAGGGTCCGGCCATCCTCAAGTTGTTTTCCAGCGAA 1310
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||||||||| | ||| | || |||||| ||| ||||| ||| | ||
Sbjct 1309 TATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTGA-CGT 1251
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||| |||||| || |||| ||| ||||| || || || || || || |
Sbjct 1250 TGTCGATGGTGTCGGACGATTCGACTTCCAACGTAATCGTCTTGCCGGTTAATGTCTTGA 1191
Query 35724 CAAATATCTGCAT 35736
| || || |||||
Sbjct 1190 CGAAGATTTGCAT 1178
>seq574
Length=30825
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || |||||||| ||| || |||||| | || || |||||||| ||
Sbjct 26599 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCATGGTTCGGCCATCTTCGAGCTGCTTTCCG 26658
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
||||| || | ||||||||||| | |||| || |||||| ||| ||||| |||
Sbjct 26659 GCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGAATCTTGGACTTG 26718
Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719
| | | | ||||| || |||||||| | ||||| || || ||||| | |||
Sbjct 26719 ACGTTATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGTGAGGGTT 26778
Query 35720 TTCACAAATATCTGCAT 35736
|| || || ||||||||
Sbjct 26779 TTGACGAAGATCTGCAT 26795
>seq1010
Length=27177
Score = 93.3 bits (102), Expect = 4e-14
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
||||||| ||||||||||||| || ||||| |||| || |||||||| || || || |
Sbjct 25515 CCTTTTGGATGTTGTAATCGGACAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 25574
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| || || || |||| ||||| || |||||| ||| ||||| || | | |
Sbjct 25575 TCAGTCGTTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAATCTTGGATTTGACATTAT 25634
Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | |||||| ||| || ||||| | ||||| || || |||||
Sbjct 25635 CGATCGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 25680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450786945159480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |