Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq598 122 9e-23 seq677 114 1e-20 seq574 113 5e-20 >seq598 Length=71582 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || |||| |||||||| | ||||| || || || ||||||||||| Sbjct 1404 CCTCCACGCAGACGCAGGACGAGGTGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGAG 1345 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || || ||||| || || || |||| |||||||| || || || Sbjct 1344 AGGGTCCGGCCATCCTCAAGTTGTTTTCCAGCGAATATCAGGCGCTGCTGGTCAGGAGGG 1285 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | |||||||||||||| || Sbjct 1284 ATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGACGATTCGACT 1225 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||| || || |||||||| || || ||||| |||||||| Sbjct 1224 TCCAACGTAATCGTCTTGCCGGTTAATGTCTTGACGAAGATTTGCAT 1178 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || | |||||| || || ||||| ||||||||| | || || || ||| Sbjct 1158 ACAAGATGCAACGTGGACTCTTTCTGAATATTGTAGTCGGACAGAGTTCGACCATCCTCG 1099 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || ||||| |||| ||||| ||||| || || ||||| || || || ||| Sbjct 1098 AGCTGCTTACCAGCAAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGA 1039 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| || || || | |||||||||||||| || || ||||| || || || Sbjct 1038 ATCTTTGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAGAGTGATCGTCTTG 979 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || ||||| |||||||| Sbjct 978 CCAGTCAACGTCTTGACGAATATTTGCAT 950 >seq677 Length=7370 Score = 114 bits (126), Expect = 1e-20 Identities = 543/851 (64%), Gaps = 19/851 (2%) Strand=Plus/Minus Query 7563 TCAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTT 7622 |||||||||| | ||||||| || ||||| || |||| | || ||| | | | Sbjct 6261 TCAACACATGATCATGCGCGTTGCCGTGGGTATATGGGGCGGCAATATCGACCGAGTCCT 6202 Query 7623 GGAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGC 7682 || |||||| | | ||||| || || || || || ||||| || |||| Sbjct 6201 CGAGACGTACAACCTCATGTCCAGCAAGTTCTTCACCCATGCGTCGCCGACGCTGTTCAA 6142 Query 7683 CGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742 ||| ||||| | ||| | || ||||| || | | |||| || ||||| Sbjct 6141 CGCCGGCACGCCTCAGTGTCAGCTTTCGTCGTGCTTCCTCGTTGACATGAAGGAGGACAG 6082 Query 7743 CATCGACGGCATTTACAACACGCTGCGCGAT-TGCGCCAATATTTCCAAATACGGCGGCG 7801 |||||| ||||| ||| ||||||| | || ||||||| || ||||| | ||||| Sbjct 6081 CATCGAGGGCATCTACGACACGCT-CAAGACATGCGCCATGATCTCCAAGATGGCCGGCG 6023 Query 7802 GAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACG 7861 | || || || ||||| | | || || | |||| ||| | |||||||| Sbjct 6022 GCATCGGGCTCAACGTGCATCGGATCCGTGCTACCGGTTCTTACATTGCCGGCACCAACG 5963 Query 7862 GAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAG 7921 | | | | |||| | |||||| | || || ||||| || ||| || | || | Sbjct 5962 GGACTTCGAACGGTGTCATTCCCATGCTTCGTGTCTTCAACAATACGGCCCGCTACGTCG 5903 Query 7922 ACCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGG 7978 ||||||| || || ||| ||| ||| |||||| || ||||||||||||||||| | Sbjct 5902 ACCAGGGCGGCAACAAGCGGCCAGGTGCCTTTGCCATATACTTGGAGCCGTGGCACGCCG 5843 Query 7979 ACATTTACGCAGTGCTAAATCTGCGTCGCAAC-ATGGGTTGCGAAGACAGCAAAGCGCGC 8037 | | | | | || ||||||| ||| |||| | || || || ||| Sbjct 5842 ATGTGTTTGAGTTTCTGGATCTGCGCAAGAACCATGGCAAG-GAGGAGGTTCGGGCCCGC 5784 Query 8038 GATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCA 8097 || || ||| | | ||||| | || || ||||| |||| |||||| | ||| Sbjct 5783 GACCTCTTCCTGGCCCTGTGGATTCCGGACCTGTTCATGAAGCGCGTGGAGAAAAACGGC 5724 Query 8098 CAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAA 8157 | ||| |||||||||||||| | ||||| | || |||||| || Sbjct 5723 GATTGGACGCTCATGTGCCCCAACGAATGCCCCGGCCTGGCCGACTGCTACGGTGATGAA 5664 Query 8158 TTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCG 8217 ||||| ||||| || | ||||| | ||| ||| ||| || ||||| | | | Sbjct 5663 TTTGAGGCTCTGTACGAAAAGTACGAGCGCGAGGGC-CGTG---GCCGCAAG--ACGGTG 5610 Query 8218 CGCGACCTGCACCGC-GCCATT--ATC---GAATGTCAAAACGAAACCGGTATGCCGTAC 8271 || | | | | | | | ||| ||| ||| || | ||||| || | || | Sbjct 5609 CGGGCTCAGAAGCTCTGGTATTCTATCCTGGAAGCACAGACGGAAACGGGCAATCCCTTT 5550 Query 8272 ATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGT 8331 ||||||||||| ||| |||||| ||| || ||||||| ||| ||||||||||| | Sbjct 5549 ATGCTGTACAAGGACCACTGCAACCGCAAGAGTAATCAAAAGAACCTGGGCACCATTCGG 5490 Query 8332 TGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGC 8391 | || || ||| | ||||| || ||||| || || |||||||| ||||| ||| Sbjct 5489 AGTTCGAACCTTTGCACGGAAATCGTCGAGTACTCGGCACCTGACGAAGTCGCCGTCTGC 5430 Query 8392 AATCTAGCGTC 8402 ||||| || || Sbjct 5429 AATCTGGCCTC 5419 >seq574 Length=30825 Score = 113 bits (124), Expect = 5e-20 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| |||||||| || ||| ||||| || ||||||||||||| | ||| | Sbjct 26578 AGGCGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCATGGTTCGG 26637 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| || || ||||| || | |||||||| ||||| || ||||| || Sbjct 26638 CCATCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCC 26697 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || ||||| || | ||||| || || ||||| || || || Sbjct 26698 TTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCAGAAGACTCCACCTCAAGGGTG 26757 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || || || | ||||| ||||| || ||||| ||| Sbjct 26758 ATTGTCTTCCCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 26799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505390939056120