Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq780 105 9e-18
>seq780
Length=34333
Score = 105 bits (116), Expect = 9e-18
Identities = 223/332 (67%), Gaps = 3/332 (1%)
Strand=Plus/Minus
Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATT 39898
||||| |||||||| |||||||| | || | || || | ||||||||| ||
Sbjct 30348 GTTTCAATAGCATTGAAGAGATAGGTCCGCTGGGCATTCTCCTTGATATATGTATCGATC 30289
Query 39899 AACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT 39958
| || || | || || |||||||| || ||| |||||||||||||| || ||
Sbjct 30288 AGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGAAATCCGTAGAAGCAA 30229
Query 39959 CTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018
| || || | || || ||||| | || | || |||| ||||| || || ||
Sbjct 30228 CGGGCCTCGGGGATCTGAACCTCGCCGCTGAACCGCTCAACCAAGTTTTCGTTGACGATG 30169
Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTC 40078
|| || ||||||||||| |||| | || || ||| || ||||| || ||
Sbjct 30168 CCGTCCGAGGCGGCAAAAAAGGCCAGGATGTGGGAAACAAAGTACTTTTCGTCATCATTC 30109
Query 40079 AAT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAAC 40135
| || |||||||| | | || || || | ||| | ||| || |||||||||||
Sbjct 30108 AGGCGGTTGTTCCAGTCGTGCAAGTCCTTGGAGAGATCGATTTCCTCGGCTGTCCAAAAG 30049
Query 40136 GACGCCTCTGCCTTTTTGTACATGTTCCATAT 40167
|| ||||||||||| |||||||| | ||| ||
Sbjct 30048 GAGGCCTCTGCCTTCTTGTACATTTGCCAAAT 30017
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697
|||||||||| ||| | |||||| ||||| || | ||||||||||| ||||| ||
Sbjct 30623 CCCTCATCTCGCGAAATGAGTTCGTTGGAAAAGGTCAAGCCAGGCATTAGGCCACGTTTC 30564
Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAAT 39757
|||||||| || |||| ||||| | ||| ||||||||||| || || || |||||
Sbjct 30563 TTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAGATGCCCTCGACCGCAGCAAAG 30504
Query 39758 GCAAC 39762
|| ||
Sbjct 30503 GCTAC 30499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686898659508840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |