Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq677 109 2e-18 seq780 87.8 6e-12 >seq677 Length=7370 Score = 109 bits (120), Expect = 2e-18 Identities = 359/541 (66%), Gaps = 28/541 (5%) Strand=Plus/Minus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| | ||||| |||||||| ||| ||||||||||| || || ||| ||| Sbjct 5945 ATTCCCATGCTTCGTGTCTTCAACAATACGGCCCGCTACGTCGACCAGGGCGGCAACAAG 5886 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA---CATTGAACGGTTT 255094 || ||||| || || |||| ||| ||||||||||||||||||| |||| |||| Sbjct 5885 CGGCCAGGTGCCTTTGCCATATACTTGGAGCCGTGGCACGCCGATGTGTTTGA---GTTT 5829 Query 255095 TTACTGCTGTCCGACAAGACC---GGCACCGAGGAGCTGATCGCCCGCGACATCTACACC 255151 | | | | || ||||| | |||| |||||| | ||||||||| ||| | Sbjct 5828 CT--GGATCTGCG-CAAGAACCATGGCAAGGAGGAGGTTCGGGCCCGCGACCTCTTCCTG 5772 Query 255152 GCTGTCTGG-TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCT 255210 || | ||| | | | || ||||| ||| |||||||| | ||| |||| || Sbjct 5771 GCCCTGTGGATTCCG-GACCTGTTCATGAAGCGCGTGGAGAAAAACGGCGATTGGACGCT 5713 Query 255211 CATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACT 255270 |||||| |||||| || ||||| || | ||||| | ||||| || ||||| || Sbjct 5712 CATGTGCCCCAACGAATGCCCCGGCCTGGCCGACTGCTACGGTGATGAATTTGAGGCTCT 5653 Query 255271 GTATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACGCCAAGTGCCCGCGAAGAAGATCT 255329 ||| |||||||||| | ||||| | || | | | |||| || ||||| ||| Sbjct 5652 GTACGAAAAGTACGAGCGCGAGGGCCGTGGCCGCAAGAC-GGTGCGGGCTCAGAAGCTCT 5594 Query 255330 GGAACACGATGGTG--CGCATGCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGA 255387 || | | || || ||| ||| |||||| || | || || | || |||| || Sbjct 5593 GGTATTCTATCCTGGAAGCA--CAGACGGAAACGGGCAATCCCTTTATGCTGTACAAGGA 5536 Query 255388 CCAC-ATAAACGCACG-GTCGAACCAACGCCACCGCGGTACGATACGCGGCTCGAACCTG 255445 |||| || |||| | || || ||| ||| || || || || | |||||||| Sbjct 5535 CCACTGCAACCGCAAGAGT--AATCAAAAGAACCTGGGCACCATTCGGAGTTCGAACCTT 5478 Query 255446 TGCACCGAGATTACGT--TGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCGT 255503 ||||| || || ||| | || || || | | || || ||||| ||||| |||| | Sbjct 5477 TGCACGGAAAT--CGTCGAGTACTCGGCACCTGACGAAGTCGCCGTCTGCAATCTGGCCT 5420 Query 255504 C 255504 | Sbjct 5419 C 5419 >seq780 Length=34333 Score = 87.8 bits (96), Expect = 6e-12 Identities = 112/153 (73%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 443715 GTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTG 443774 || || ||||||| |||||| || | || || || || |||| |||||||||||||| Sbjct 30499 GTAGCCTTTGCTGCGGTCGAGGGCATCTTCTTCAGTGGTGCCTTT-GCCTCCATCTTCTG 30557 Query 443775 GTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGA 443834 | | || || ||||| || |||| || |||||||| |||||||| || || || Sbjct 30558 GCTCAAGAAACGTGGCCTAATGCCTGGCTTGACCTTTTCCAACGAACTCATTTCGCGAGA 30617 Query 443835 CGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||||||||||| || || |||||||| || Sbjct 30618 TGAGGGTTTGCACACGGATTTTGCCTGTCTCCT 30650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588311965994545