Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq677 170 2e-37 seq780 86.0 7e-12 >seq677 Length=7370 Score = 170 bits (188), Expect = 2e-37 Identities = 663/1024 (65%), Gaps = 20/1024 (2%) Strand=Plus/Minus Query 104624 GAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAG 104683 ||||| |||||||| ||| | | ||||| || || |||| ||||| || | ||| Sbjct 5858 GAGCCGTGGCACGCCGATGTGTTTGAGTTTCTGGATCTGCGCAAGAACCATGGCAAGGAG 5799 Query 104684 GAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGA 104743 |||| ||| |||||| |||||| || || |||||||| || || ||||||||| | Sbjct 5798 GAGGTTCGGGCCCGCGACCTCTTCCTGGCCCTGTGGATTCCGGACCTGTTCATGAAGCGC 5739 Query 104744 GTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGA 104802 || ||| | | ||| ||||| | ||| | || || || || || || || || |||| Sbjct 5738 GTGGAGAAAAACGGCGATTGGACGCTCATGTGCCCCAACGAATGCCCC-GGCCTGGCCGA 5680 Query 104803 TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGA 104861 | ||||| || ||||| || || ||| |||||||||| || || || ||| Sbjct 5679 CTGCTACGGTGATGAATTTGAGGCTCTGTACGAAAAGTACGAGCGCGAGGGCCGTGGCCG 5620 Query 104862 CTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACT 104920 | |||||||| ||| | || | | ||| | |||| || | | || || || || Sbjct 5619 CAA-GACGGTGCGGGCT-CAGAAGCTCTGGTATTCTATCCTGGAAGCACAGACGGAAACG 5562 Query 104921 GGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTG 104980 || | || | ||||| ||||| ||| ||| |||| ||||||||||||||||| || Sbjct 5561 GGCAATCCCTTTATGCTGTACAAGGACCACTGCAACCGCAAGAGTAATCAAAAGAACCTG 5502 Query 104981 GGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 || || |||||| || || || || |||||| | || | | | || || Sbjct 5501 GGCACCATTCGGAGTTCGAACCTTTGCACGGAAATCGTCGAGTACTCGGCACCTGACGAA 5442 Query 105041 ACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG 105100 || || || || || || ||| | || || || | ||| || | | ||| | Sbjct 5441 GTCGCCGTCTGCAATCTGGCCTCACTAGCCCTGCCTGCCTTTGTCGA-CTATGAACAGGG 5383 Query 105101 -ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAG 105159 | || | | || |||||||| || ||| | |||| | ||||| || || Sbjct 5382 CTGCTACGACTTCCAGAAGCTCCACGAGGTGACGCAGGTTGTCGTCCGTAACCTCAATAG 5323 Query 105160 AGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCG 105219 | || || || |||||| ||||| || || || || ||| | ||||| Sbjct 5322 GATCATCGACGTCAACCATTACCCAGTTGAAGAGGCCCGCAACAGCAACATGCGGCACCG 5263 Query 105220 TCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATG-TATTCATTCTTTGTCGCCACGCAT 105278 || |||||| | ||||| ||||| || || |||| | ||| || | ||| | | Sbjct 5262 GCCGATTGGTGTGGGTGTCCAGGGCCTGGCCGATGCTTTTCTGGCTCT-CCGCATGCCGT 5204 Query 105279 TTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCG 105338 |||| || || || ||| | || || || || || ||||| || ||||||| Sbjct 5203 TTGAGTCTCCGGAGGCCCGGGAGCTAAACCAGCAAATCTTCGAAACCATCTACCACGCCG 5144 Query 105339 CTCTTGAG-GCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGT 105397 | |||||| || ||| |||| || || || || || | ||| |||| Sbjct 5143 C-CTTGAGTGCCTCGATGGAGCTGGCCAAGAGCGAAGGGCCCTACTCGTCGTTTAAGGGA 5085 Query 105398 TCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC----AAGCT 105453 || || || || | || ||||| || ||||| |||| ||||||||| || |||| Sbjct 5084 TCGCCGGCGTCGGAGGGCGTGCTCCAGTTTGACATGT-GGAAGGTGAAGCCTTCAGAGCT 5026 Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513 || || |||||| | || ||| | ||||||||| | || | || |||||||| Sbjct 5025 ---CTGGGAGTGGGAAACGCTACGGGAGCAGATCAAGGAGCATGGCATACGCAACAGTCT 4969 Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573 || | || || ||||| || ||| ||| | || ||| | || ||||| || ||||| Sbjct 4968 GCTGGTAGCCCCCATGCCGACGGCCAGCACGTCGCAGATCCTCGGCAATAACGAGTGCTT 4909 Query 105574 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633 || || |||||| | ||||| || | | || | || ||||| ||||| | | || Sbjct 4908 CGAGCCTTACACGTCCAACATTTACCAGCGACGCGTGCTGGCGGGCGAGTTCCAGGTGGT 4849 Query 105634 CAAC 105637 |||| Sbjct 4848 CAAC 4845 >seq780 Length=34333 Score = 86.0 bits (94), Expect = 7e-12 Identities = 156/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 94789 ||||||||| || |||| || ||||| || |||||||| ||| | | ||||| Sbjct 30417 AACAGTTCCTTGCATTCGCAAAAAAGCCGACTGGGCTATTCGCTGGATCCAGGACAAAAA 30476 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | ||| | |||||| | || | | || ||||| || ||||| ||||||||| || Sbjct 30477 CTCGT-CGTTTGCTCAACGCTTGGTAGCCTTTGCTGCGGTCGAGGGCATCTTCTTCAGTG 30535 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || |||| | | || | ||||||||||| || || || ||||| || | ||| | Sbjct 30536 GTGCCTTTGCCTCCATCTTCTGGCTCAAGAAACGTGGCCTAATGCCTGGCTTGACCTTTT 30595 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||| || || || || || ||||| | ||| || ||||| Sbjct 30596 CCAACGAACTCATTTCGCGAGATGAGGGTTTGCACACGGATTTTGC 30641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583252189612440