Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq598 91.5 9e-14 seq574 86.0 4e-12 >seq598 Length=71582 Score = 91.5 bits (100), Expect = 9e-14 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || |||| ||| | || | |||||| || || ||||||||||| || || || || Sbjct 1623 AGGCGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATGTTATAGTCGCTCAGAGTACGT 1564 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| |||||||| || |||||||| | ||||||||||| || || | || ||| Sbjct 1563 CCATCTTCCAGTTGTTTTCCAGCAAATATGAGGCGCTGTTGGTCGGGAGGAATGCCTTCC 1504 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| || ||| | || ||| | ||| || || || ||||||| ||| Sbjct 1503 TTGTCT-TGTATTTTCGACTTCACGTTGTCAATCGTATCCGAAGATTCAACTTCCAAGGT 1445 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || | || || ||||| || ||||| Sbjct 1444 AATCGTCTTTCCCGTCAGAGTCTTGACAAAGATTTGCAT 1406 >seq574 Length=30825 Score = 86.0 bits (94), Expect = 4e-12 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | ||| |||| || | || |||||||||||||| || ||||| || || Sbjct 26567 CGCCACCGCGAAGGCGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGC 26626 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | ||||| | ||||| || || || |||||||| || | ||||| ||||| || | Sbjct 26627 TCATGGTTCGGCCATCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGG 26686 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCC 34656 | | |||||||| || ||| || | || ||| || || ||||| |||| Sbjct 26687 GAATGCCCTCCTTATC-CTGAATCTTGGACTTGACGTTATCGATGGTGTCAGAAGACTCC 26745 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || || | ||| || || || || || | ||||| || || |||||||| ||| Sbjct 26746 ACCTCAAGGGTGATTGTCTTCCCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 26799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725069959173