Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cerataphis_20brasiliensis_20yeast-
like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq574 156 1e-32
seq598 154 3e-32
seq1010 143 6e-29
>seq574
Length=30825
Score = 156 bits (172), Expect = 1e-32
Identities = 169/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||| ||||| |||||| ||| || |||||||| || || | |||
Sbjct 26575 CGAAGGCGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCATGGTT 26634
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| |||||||| |||||||| || || ||||| ||||| || ||||| || |||| ||
Sbjct 26635 CGGCCATCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCC 26694
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| ||||| ||||| || ||||| |||||||||||||| || ||||| ||
Sbjct 26695 TCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCAGAAGACTCCACCTCAAGG 26754
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| ||||| |||||||| || || || || | |||||| ||
Sbjct 26755 GTGATTGTCTTCCCCGTGAGGGTTTTGACGAAGATCTGCATCTT 26798
>seq598
Length=71582
Score = 154 bits (170), Expect = 3e-32
Identities = 148/190 (78%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || || || |||||||| || || || || || | |||||||| |||||
Sbjct 933 AGGACAAGATGTAGCGTTGACTCTTTCTGAATATTGTAGTCGGACAGGGTCCTGCCATCC 874
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||| || || || ||||| | |||||||||||| ||||||| || |||||||||
Sbjct 873 TCCAACTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCGGGAGGAATACCCTCCTTGTCC 814
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||| || ||||| || ||||| ||||||||||||
Sbjct 813 TGGATCTTGGACTTGACATTATCGATAGTATCAGACGACTCTACCTCAAGAGTGATCGTC 754
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 753 TTGCCAGTGA 744
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || | ||||||||||| || || || || || | || || | |||||
Sbjct 1161 AGGACAAGATGCAACGTGGACTCTTTCTGAATATTGTAGTCGGACAGAGTTCGACCATCC 1102
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || ||||| ||||| ||||| || || |||| || |||||||||
Sbjct 1101 TCGAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTGTCC 1042
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| |||||| ||||| || ||||||||||| || ||| || || ||||||||||||
Sbjct 1041 TGAATCTTTGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAGAGTGATCGTC 982
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | |||||
Sbjct 981 TTGCCAGTCAACGTCTTGACGAATATTTGCAT 950
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| | |||| ||||| || |||||||| || || || | |||||||
Sbjct 1617 AGCACAAGGTGCAAAGTGCTTTCTTTCTGAATGTTATAGTCGCTCAGAGTACGTCCATCT 1558
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||| || || || || || || ||||| |||||||| ||||||| |||||||||||
Sbjct 1557 TCCAGTTGTTTTCCAGCAAATATGAGGCGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCT 1498
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| || || |||||||| || || || || || |||||| || | || ||||||
Sbjct 1497 TGTATTTTCGACTTCACGTTGTCAATCGTATCCGAAGATTCAACTTCCAAGGTAATCGTC 1438
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| |||||||| ||||| | |||||
Sbjct 1437 TTTCCCGTCAGAGTCTTGACAAAGATTTGCAT 1406
Score = 145 bits (160), Expect = 2e-29
Identities = 167/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | ||||| ||||| | |||||||||||| |||||||| || || | ||
Sbjct 1402 TCCACGCAGACGCAGGACGAGGTGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAG 1343
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
||||| ||||| || || || || || ||||| || ||||| || ||||||||||| |
Sbjct 1342 GGTCCGGCCATCCTCAAGTTGTTTTCCAGCGAATATCAGGCGCTGCTGGTCAGGAGGGAT 1283
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| ||||| ||||| ||||| || ||||| ||||||||||| || ||| || ||
Sbjct 1282 GCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGACGATTCGACTTC 1223
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
| || |||||||| || || | ||||| || || | |||||
Sbjct 1222 CAACGTAATCGTCTTGCCGGTTAATGTCTTGACGAAGATTTGCAT 1178
>seq1010
Length=27177
Score = 143 bits (158), Expect = 6e-29
Identities = 139/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
||||||||||| ||||| | || || | || || || ||||||||||| ||||||||
Sbjct 25517 TTTTGGATGTTGTAATCGGACAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 25576
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| |||||||| || ||||||| || ||||| ||||| ||||| ||| || || |||
Sbjct 25577 AGTCGTTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAATCTTGGATTTGACATTATCG 25636
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| || || |||||||| ||||| ||||| ||||| || |||||||| ||
Sbjct 25637 ATCGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTTACGAA 25695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159134460219065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |