Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq780 111 1e-19 >seq780 Length=34333 Score = 111 bits (122), Expect = 1e-19 Identities = 201/292 (69%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 4813 CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAA 4872 ||||| |||| || || || || ||| || | || || || || || || || | Sbjct 30307 CTTGA-TATATGTATCGATCAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGA 30249 Query 4873 TCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTA 4932 ||||||||||||| ||||| | || || | | ||||| ||| | || | || | Sbjct 30248 TCTGAAATCCGTAGAAGCAACGGGCCTCGGGGATCTGAACCTCGCCGCTGAACCGCTCAA 30189 Query 4933 CTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAA 4992 | ||||||||||| || || ||||| ||| |||||||| |||| | || || | || Sbjct 30188 CCAAGTTTTCGTTGACGATGCCGTCCGAGGCGGCAAAAAAGGCCAGGATGTGGGAAACAA 30129 Query 4993 AGTACTGTTCGTCAGGCTTAA---GTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAA 5049 |||||| ||||||| || | | || ||||||| | |||| || || | | ||| | Sbjct 30128 AGTACTTTTCGTCATCATTCAGGCGGTTGTTCCAGTCGTGCAAGTCCTTGGAGAGATCGA 30069 Query 5050 CTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAAT 5101 ||| || | |||||||| || || || || || |||||||| |||||| Sbjct 30068 TTTCCTCGGCTGTCCAAAAGGAGGCCTCTGCCTTCTTGTACATTTGCCAAAT 30017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427043453288273