Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq574 123 2e-23 seq598 111 1e-19 seq1010 96.9 2e-15 >seq574 Length=30825 Score = 123 bits (136), Expect = 2e-23 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGG--CGCTCGTCGT 44186 || ||||| || ||||||||||| ||||||||||| ||| | ||| || | || | Sbjct 26587 ACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCA--TGGTTCGGCCATCTT 26644 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| ||||||||||| | |||||||| || | || | || ||||| ||| Sbjct 26645 CGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCT 26704 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | | | |||||||| | || |||||||| | || || |||| Sbjct 26705 GAATCTTGGACTTGACGTTATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCT 26764 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||||||| || |||||||| ||||| Sbjct 26765 TCCCCGTGAGGGTTTTGACGAAGATCTGCAT 26795 >seq598 Length=71582 Score = 111 bits (122), Expect = 1e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || || ||||| | ||| ||| || ||||||||||| Sbjct 1411 TTGCATACCTCCACGCAGACGCAGGACGAGGTGCAAAGTGGACTCTTTCTGGATGTTGTA 1352 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | ||| || | || || || || || || || || |||| |||||||| || Sbjct 1351 GTCAGAGAGGGTCCGGCCATCCTCAAGTTGTTTTCCAGCGAATATCAGGCGCTGCTGGTC 1292 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | ||| | || ||||| ||| ||||| ||| | | | |||||||||| || Sbjct 1291 AGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGACGA 1232 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || |||| |||||||||||| || || | ||||| |||||||||||||| Sbjct 1231 TTCGACTTCCAACGTAATCGTCTTGCCGGTTAATGTCTTGACGAAGATTTGCAT 1178 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||| ||||| | ||||| || || || ||||| || ||| || || | || Sbjct 1618 CAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATGTTATAGTCGCTCAGAGTACGTCCATC 1559 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 ||||| || || || ||||| || | ||||| || || | ||| | |||||||| || Sbjct 1558 TTCCAGTTGTTTTCCAGCAAATATGAGGCGCTGTTGGTCGGGAGGAATGCCTTCCTTGTC 1499 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||| ||| ||||| | | || || || | ||||| || |||| |||||||| Sbjct 1498 TTGTATTTTCGACTTCACGTTGTCAATCGTATCCGAAGATTCAACTTCCAAGGTAATCGT 1439 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || ||||| || ||||||||||| Sbjct 1438 CTTTCCCGTCAGAGTCTTGACAAAGATTTGCAT 1406 >seq1010 Length=27177 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 ||||||||||||||||||||| || || |||| || |||||||| ||||| |||| Sbjct 25515 CCTTTTGGATGTTGTAATCGGACAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 25574 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 ||| || || ||||| | ||| | || ||||| ||| ||||| || | | Sbjct 25575 TCAGTCGTTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAATCTTGGATTTGACATTAT 25634 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || ||||| | || || ||||| | || || ||||| ||||| |||||||| |||| Sbjct 25635 CGATCGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTTACGA 25694 Query 44328 A 44328 | Sbjct 25695 A 25695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359985218500677