Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq24 123 5e-23 >seq24 Length=328731 Score = 123 bits (136), Expect = 5e-23 Identities = 148/197 (75%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 230443 CGCCTTA-TTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACC 230500 ||| ||| |||||||||||||| | ||| ||| ||||| ||||| ||||| ||||||| Sbjct 173904 CGCATTACTTGGCATGAACGCT-ACCTTGATGAAGCAGTATATCGAGTTCGTTGCCGACC 173962 Query 230501 GCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTA 230560 || || | || ||||| || |||| || |||||| || || ||||||| || | Sbjct 173963 GCCTTCTCGTCGCACTGGGCAACGAAAAGATGTACAGGTCGTCAAATCCCTTTGATTTCA 174022 Query 230561 TGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATC 230620 |||| ||| ||||| || || |||||||| ||||||||||| || ||||||||| Sbjct 174023 TGGAAAACATATCGCTAGGGGGCAAAACCAACTTTTTCGAAAAGCGGGTTGGTGACTATC 174082 Query 230621 AGAGGCCTGGTGTGATG 230637 ||| | | ||||| ||| Sbjct 174083 AGAAGGCCGGTGTCATG 174099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057816166152140