Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq24 114 1e-20
>seq24
Length=328731
Score = 114 bits (126), Expect = 1e-20
Identities = 199/287 (69%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
||||| ||||| ||||| | ||| | || ||||| |||||||| || ||||||
Sbjct 173459 ATATAGGTATCGATCAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATAATCTGA 173400
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591
||||| |||||||| || ||||| | || || || || || || || || ||| |
Sbjct 173399 AATCCGTAGAAGCAACGGGCCTCGGGGATCTGAACCTCGCCGCTGAACCGCTCAACCAAG 173340
Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651
|| ||||| ||||| ||||| || || ||||| |||| ||||| | |||||
Sbjct 173339 TTTTCATTGACGATGCCGTCCGAGGCGGCGAAAAAGGCCAGGATGTGGGACACAAAATAC 173280
Query 16652 TTTTCGTCA-GATGTA--AGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708
||||||||| || | | | | ||| || | || || ||||| | ||| | |||
Sbjct 173279 TTTTCGTCATCATTCAGGCGGTTGTTCCAGTCATGCAAGTCCTTGGAGAGATCTATTTCC 173220
Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755
|| | |||||||| ||| ||||||| || ||||||| ||||||
Sbjct 173219 TCGGCTGTCCAAAATGAGGCCTCTGCCTTCTTGTACATTTGCCAAAT 173173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511410705030960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |