Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq53 127 2e-24
>seq53
Length=178968
Score = 127 bits (140), Expect = 2e-24
Identities = 132/173 (76%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 145679 GCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGT 145738
||| ||||| || ||||||| || ||||||||| ||||| |||| ||| || | |||
Sbjct 126693 GCTCCAGGGCGTCTACGTGGTCGACGTAGACGTGGGCGTCACCCATGACATGCGTAAAGC 126634
Query 145739 CCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTA 145798
|| ||| | ||| | || |||||||| ||| | |||||||| | ||||||||| |
Sbjct 126633 TGCCAGGCACCAGGTCGCAGACGTGGGCGAGCATATGCGTCAGCAGCGCGTAGCTGGCAA 126574
Query 145799 TGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851
||||||||||||| || || |||||||| | || | ||| || |||||||||
Sbjct 126573 TGTTGAAGGGCACGCCGAGTCCCATGTCGCAGGACCTCTGATATAGCTGGCAG 126521
Score = 114 bits (126), Expect = 2e-20
Identities = 270/402 (67%), Gaps = 12/402 (3%)
Strand=Plus/Minus
Query 145869 CACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCG 145927
|||||||||||| ||| || | |||||||||||||| |||||| || |||| |
Sbjct 126443 CACGTAGAACTGAGCA-AGCATGTGGCAGGGCGGCAAAGCCATGATCTTCAAGTCCTTGG 126385
Query 145928 GGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGG---GTTCCTCTTGATCTCCCCTA 145984
||||||| || | | || || | || | | || ||||| | | || |
Sbjct 126384 GGTTCCATGCAGACAAGATGATGCGCCGGTCGTACGGCATGTTCCGC---AACTTGTGGA 126328
Query 145985 TCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACG 146044
| | ||| |||||||| |||||||| | ||| || | ||||| |||||||||
Sbjct 126327 TGACGTCGGCAAGCTGGTCGACGCCCTGGTCGGTGTAGTCGGCCTTGGCATCCACGTACT 126268
Query 146045 CGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGT 146104
|| || || |||| |||||| || || || ||||| |||||||| ||| ||| | |
Sbjct 126267 GAGCTCCAAAATGCCGCCACTGAAAGCCATATACGGGTCCCAGGTCACCGACCTCGCGAT 126208
Query 146105 GCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGC 146164
|| || ||| | | | | ||||| || || || |||||| | ||||| ||||||||||
Sbjct 126207 GCGAGAGACCGACGCTGTCAAGGAACTCGCGAGAGCCGTTGCCATCCCAAATCTTGACGC 126148
Query 146165 C--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTC 146222
| | |||| ||| || || |||| ||| ||||||||| |||| ||| |
Sbjct 126147 CTGCGTCGC--TCAGCGCAAGCGAAGACGTGTTGCCCTCGATGAACCAAAGCAACTCGGC 126090
Query 146223 GAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264
| ||| || | |||||| | ||| || || || || ||
Sbjct 126089 AATGACGGCCTTGAGGAAGACGCGCTTCGTTGTAAGAAGCGG 126048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590072536695120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |