Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq53 127 2e-24 >seq53 Length=178968 Score = 127 bits (140), Expect = 2e-24 Identities = 132/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 145679 GCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGT 145738 ||| ||||| || ||||||| || ||||||||| ||||| |||| ||| || | ||| Sbjct 126693 GCTCCAGGGCGTCTACGTGGTCGACGTAGACGTGGGCGTCACCCATGACATGCGTAAAGC 126634 Query 145739 CCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTA 145798 || ||| | ||| | || |||||||| ||| | |||||||| | ||||||||| | Sbjct 126633 TGCCAGGCACCAGGTCGCAGACGTGGGCGAGCATATGCGTCAGCAGCGCGTAGCTGGCAA 126574 Query 145799 TGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||||||||||||| || || |||||||| | || | ||| || ||||||||| Sbjct 126573 TGTTGAAGGGCACGCCGAGTCCCATGTCGCAGGACCTCTGATATAGCTGGCAG 126521 Score = 114 bits (126), Expect = 2e-20 Identities = 270/402 (67%), Gaps = 12/402 (3%) Strand=Plus/Minus Query 145869 CACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCG 145927 |||||||||||| ||| || | |||||||||||||| |||||| || |||| | Sbjct 126443 CACGTAGAACTGAGCA-AGCATGTGGCAGGGCGGCAAAGCCATGATCTTCAAGTCCTTGG 126385 Query 145928 GGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGG---GTTCCTCTTGATCTCCCCTA 145984 ||||||| || | | || || | || | | || ||||| | | || | Sbjct 126384 GGTTCCATGCAGACAAGATGATGCGCCGGTCGTACGGCATGTTCCGC---AACTTGTGGA 126328 Query 145985 TCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACG 146044 | | ||| |||||||| |||||||| | ||| || | ||||| ||||||||| Sbjct 126327 TGACGTCGGCAAGCTGGTCGACGCCCTGGTCGGTGTAGTCGGCCTTGGCATCCACGTACT 126268 Query 146045 CGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGT 146104 || || || |||| |||||| || || || ||||| |||||||| ||| ||| | | Sbjct 126267 GAGCTCCAAAATGCCGCCACTGAAAGCCATATACGGGTCCCAGGTCACCGACCTCGCGAT 126208 Query 146105 GCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGC 146164 || || ||| | | | | ||||| || || || |||||| | ||||| |||||||||| Sbjct 126207 GCGAGAGACCGACGCTGTCAAGGAACTCGCGAGAGCCGTTGCCATCCCAAATCTTGACGC 126148 Query 146165 C--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTC 146222 | | |||| ||| || || |||| ||| ||||||||| |||| ||| | Sbjct 126147 CTGCGTCGC--TCAGCGCAAGCGAAGACGTGTTGCCCTCGATGAACCAAAGCAACTCGGC 126090 Query 146223 GAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 | ||| || | |||||| | ||| || || || || || Sbjct 126089 AATGACGGCCTTGAGGAAGACGCGCTTCGTTGTAAGAAGCGG 126048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590072536695120