Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq70 113 4e-20
seq12 107 2e-18
seq14 91.5 1e-13
seq69 89.7 4e-13
>seq70
Length=137430
Score = 113 bits (124), Expect = 4e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || || ||||| || ||||||| || || ||| |||||||| ||||| || |
Sbjct 82944 CTCCTTCTGTATGTTATAGTCGCTCAGGGTTCGGCCATCTTCGAGCTGCTTTCCGGCAAA 82885
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
|||||| |||||||| ||||| || |||||||||||||| ||| || || || |
Sbjct 82884 GATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTT 82825
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|||| |||||| | ||| ||||| | || | || || || || || ||||| ||
Sbjct 82824 GTCGATGGTGTCAGAAGACTCCACCTCAAGAGTGATTGTCTTCCCTGTGAGGGTTTTGAC 82765
Query 118727 AAAAATCTGCAT 118738
||| ||||||||
Sbjct 82764 AAAGATCTGCAT 82753
>seq12
Length=470578
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| || | | || | ||| | || |||||||| || ||||||||||||
Sbjct 224113 TACCGCCGCGCAAACGAAGGACAAGGTGCAACGTGGACTCTTTCTGGATGTTGTAATCGG 224054
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| || |||||| ||||| || ||||| |||| || ||||| ||||| || |
Sbjct 224053 ACAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGG 223994
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| ||||| || || | |||| |||||| | ||||
Sbjct 223993 GAATACCCTCCTTGTCCTGGATTTTCGACTTCACATTATCGATGGTGTCGGACGATTCGA 223934
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | || | ||| ||||| || | || || ||||| || |||||
Sbjct 223933 CTTCCAAAGTGATCGTCTTGCCAGTTAATGTCTTCACAAAGATTTGCAT 223885
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 118548 TCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAG 118607
||||| ||||| ||||||||||||| ||| || ||| || || |||||||| || |
Sbjct 224303 TCTTTCTGAATATTGTAATCGCTCAGAGTACGTCCATCTTCCAGTTGTTTTCCGGCAAAT 224244
Query 118608 ATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGT 118667
||||| ||||| || ||||| || ||||| ||||||||| ||||| || || |
Sbjct 224243 ATGAGGCGCTGTTGGTCGGGGGGAATGCCTTCCTTGTCTTGTATTTTCGACTTCACATTG 224184
Query 118668 TCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 118727
|| | || |||| || || || | || | ||| || || |||| ||| || ||
Sbjct 224183 TCAATCGTATCCGAAGATTCAACTTCCAAAGTAATCGTCTTTCCCGTCAAAGTCTTGACG 224124
Query 118728 AAAATCTGCAT 118738
|| || |||||
Sbjct 224123 AATATTTGCAT 224113
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| || | || || | || | ||||||||| || ||||||||||| |||
Sbjct 223885 TACCGCCGCGCAAGCGCAGGACAAGATGTAGTGTAGACTCCTTCTGAATGTTGTAGTCGG 223826
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || | |||||| | ||||||||| || |||| | || || ||||||||||
Sbjct 223825 ACAAGGTCCTGCCATCCTCCAACTGTTTTCCGGCAAAGATCAAGCGTTGTTGATCGGGAG 223766
Query 118630 GTATGCCCTCCTTGTC 118645
| || |||||||||||
Sbjct 223765 GAATACCCTCCTTGTC 223750
>seq14
Length=772799
Score = 91.5 bits (100), Expect = 1e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
||||| |||||||||||| || || || ||| || ||||| || || ||| ||||
Sbjct 69850 TTTTGGATGTTGTAATCGGACAGGGTTCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATC 69909
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| || || ||||| ||||| || ||||||| || ||| || ||||| | |||
Sbjct 69910 AGTCGTTGTTGATCCGGAGGAATAACCTCCTTATCCTGAATCTTGGATTTAAAGTTATCG 69969
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| || |||| ||||||||||| ||| | |||||||| || || || || || |||
Sbjct 69970 ATCGTTTCCGACGACTCGACCTCGAGGGTGATGGTTTTGCCCGTTAGGGTCTTGACGAAA 70029
>seq69
Length=174959
Score = 89.7 bits (98), Expect = 4e-13
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 133222 GGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACG 133281
|||||||||| || |||||||| || || ||||||| | || | || |||||| | |
Sbjct 172242 GGTTGACCACCTGGAACTCGCCCGCCAGTACGCGTCGCTGGTAGATGTTGGACGTGTAAG 172301
Query 133282 GTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCA 133341
| ||||| | ||||||||||| || || |||| ||| | ||||| ||||| ||||
Sbjct 172302 GCTCGAAGCACTCGTTGTTGCCAAGGATTTGCGACGTGCTGGCCGTCGGCATAGGGGCCA 172361
Query 133342 CCAACAAAGAGTTTCTTACGCCGTACT 133368
||| || | ||| | || ||| ||||
Sbjct 172362 CCAGCAGACTGTTGCGTATGCCATACT 172388
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/205 (70%), Gaps = 6/205 (3%)
Strand=Plus/Plus
Query 134121 TTGTTCTTTACGCGTTTCATGAATAGATCGGGAATCCACAGGCCGAGCATTAAATCGCGA 134180
|| |||| ||||| |||||||| || ||||||||||||||| | | | | ||||||
Sbjct 173126 TTTTTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGGCTAAGAAGAGGTCGCGA 173185
Query 134181 GCTTTAGTGTCTTCGGAGCCCATGTTGCGT-CTCAAGTTGAGAAACTCATAAATTTCCGG 134239
||| | || || | ||||| | | | | ||| | ||||||||| | | || |
Sbjct 173186 GCTCGAACCTCCTCCTTG-CCATGGTTCTTGCGCAAATCCAGAAACTCAAAGACATCAGC 173244
Query 134240 ATGCCA-CGGCTCGATGTAGGCGGCGAGGGCACCTTTTCGC---TTACCACCCTGGTCGA 134295
|||||| ||||| | ||| ||| | ||||||| ||| || || ||||||||||
Sbjct 173245 ATGCCATTGGCTCCAGGTATATGGCAAAGGCACCTGGCCGCTTGTTGCCGCCCTGGTCGA 173304
Query 134296 CGTGACGCACCATGTTGTTGAAGAC 134320
||| || || ||||||| |||||
Sbjct 173305 CGTAGCGGGCCGTGTTGTTAAAGAC 173329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433827343935976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |