Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq69 134 3e-26 >seq69 Length=174959 Score = 134 bits (148), Expect = 3e-26 Identities = 411/625 (66%), Gaps = 24/625 (4%) Strand=Plus/Minus Query 248827 TTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAA 248886 |||| ||||| || |||||| || ||||| || || | || ||||||||||| || Sbjct 173725 TTTGGCTTCAAGACTCTGGAGCGTTCTTATCTGCTGAAGCTCGACGGCAAGATCGTTGAG 173666 Query 248887 CGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGC 248946 || || |||||| | ||||| || || || || || || | || || | Sbjct 173665 CGCCCCCAACACATGATCATGCGCGTTGCCGTGGGTATATGGGGCGACAATATCGACCGA 173606 Query 248947 GTGCTCGAGACGTACACCGGAATG---AGTGAACGCTGGATGACACATGCCACACCGACG 249003 || ||||| ||||||| | ||| || | | || | || ||||| | ||| || Sbjct 173605 GTCCTCGAAACGTACAACCTCATGTCCAGCAAGCTCT---TCACCCATGCGTCGCCGGCG 173549 Query 249004 CTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCA 249062 || |||||||| || || | || | || ||| ||||||||| || ||| |||| | Sbjct 173548 CTGTTCAACGCTGGCACGCCTC-AGTGCCAACTGTCCTCGTGCTTCCTCGTTGACATGAA 173490 Query 249063 AGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATTTCTAA 249119 || ||| |||| |||||||| |||||||| | ||||| || | ||| ||||| Sbjct 173489 GGATGACAGCATCGAGGGCATTTACGACACGCTCA---AGACGTGCGCCATGATCTCTAA 173433 Query 249120 ATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAAC--ATCCGAGCGAAGGGTTCGTACATC 249177 | || || || ||||| ||| || | || | ||||| || | || || | ||| Sbjct 173432 GATGGCCGGTGGCATCGGGCTCAACG--TGCATCGGATCCGTGCTACCGGCTCTTGCATT 173375 Query 249178 AAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACC 249237 || || || ||| | | ||| || | ||| | ||||| |||| | ||| Sbjct 173374 GCCGGCACCAACGGGACCTCGAACGGTGTCATTCCCATGCTTCGTGTCTTTAACAACACG 173315 Query 249238 GCCAGGTTCATCAACCAGGCCGG----GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGA 249293 ||| | | | || |||||| ||| || | ||| | | || ||||| || |||| Sbjct 173314 GCCCGCTACGTCGACCAGGGCGGCAACAAGCGGCCAGGTG-CCTTTGCCATATACCTGGA 173256 Query 249294 -AGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGC 249352 ||||| || ||| | || ||||| ||||| ||| |||||| | ||||| ||| Sbjct 173255 GCCAATGGCATGCTGATGTCTTTGAGTTTCTGGATTTGCGCAAGAACCATGGCAAGGAGG 173196 Query 249353 TCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCG 249412 | |||| || |||||||||| | ||||||| | ||||| |||||||| |||| Sbjct 173195 AGGTTCGAGCTCGCGACCTCTTCTTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGCG 173136 Query 249413 TCAAGGCCGACGGCGATTGGACGCT 249437 | || |||| ||||||||||| Sbjct 173135 TGGAGAAAAACGGTGATTGGACGCT 173111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073758448088704