Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq24 104 5e-17
>seq24
Length=328731
Score = 104 bits (114), Expect = 5e-17
Identities = 303/468 (65%), Gaps = 29/468 (6%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| |||||||| || || || || ||||||||||||||||| || || ||||| ||||||
Sbjct 173650 GTGGCCTTTGCCGCGGTCGAGGGTATCTTCTTTAGTGGTGCCTTTGCCTCCATCTTCTGG 173709
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | || | ||||||| | |||| ||||| || ||||||| | ||
Sbjct 173710 CTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTTTCCAACGAACTCATTTCGCGAGAT 173769
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTG---------TTGAAAAA--GGGTTTTG 102086
|||||| | || ||||||||||| | ||| | ||||| |||
Sbjct 173770 GAAGGTTTGCACACGGACTTTGCATGTCTCCTGCACTCGCACCTCAAAAACCGGG----- 173824
Query 102087 TTGATACCCCATCAAGAGAAAGG--ATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGA 102144
||| ||| | ||| || ||| || |||| || |||||| || ||
Sbjct 173825 --------CCAGCAA---ACAGGTCATCTATGACATCATCACCGATGCCGTCGCCATCGA 173873
Query 102145 ACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGAT 102204
|||||||||||| || | ||||||| |||| | || |||||| | |||||
Sbjct 173874 ACAAGAATTTCTAACCGAAGCCCTGCCCTGCGCATTACTTGGCATGAACGCTACCTTGAT 173933
Query 102205 GAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCA 102264
|| ||||| || || || || || || || | || | | |||| ||||||
Sbjct 173934 GAAGCAGTATATCGAGTTCGTTGCCGACCGCCTTCTCGTCGCACTGGGCAACGAAAAGAT 173993
Query 102265 CTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAA 102324
|| | | || ||||| |||||||| || || || || | | || |||||
Sbjct 173994 GTACAGGTCGTCAAATCCCTTTGATTTCATGGAAAACATATCGCTAGGGGGCAAAACCAA 174053
Query 102325 CTTTTTTGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGC 102372
|||||| |||||| | || | || ||||| ||| ||||||||
Sbjct 174054 CTTTTTCGAAAAGCGGGTTGGTGACTATCAGAAGGCCGGTGTCATGGC 174101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989576671511990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |