Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq24 118 8e-22
>seq24
Length=328731
Score = 118 bits (130), Expect = 8e-22
Identities = 297/441 (67%), Gaps = 14/441 (3%)
Strand=Plus/Plus
Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807
|||||||||| || || || || || | ||| ||| | ||||| |||| |||||||
Sbjct 173651 TGGCCTTTGCCGCGGTCGAGGGTATCTTCTTTAGTGGTGCCTTTGCCTCCATCTTCTGGC 173710
Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867
| ||||| ||| |||||||| || ||| | ||||||||||| | ||| || || |
Sbjct 173711 TCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTTTCCAACGAACTCATTTCGCGAGATG 173770
Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC 22927
||||| | ||| |||||||| ||| | ||| ||| | ||| |||||| | |
Sbjct 173771 AAGGTTTGCACACGGACTTTGCATGTCTCCTGCACTCGCACCT--CAA--AAACCGGGCC 173826
Query 22928 AGGACGATGCACATC----AAATCATATCTGATGCCGTTGACATTG-AGACGGCTTTCTT 22982
|| | | |||| | ||||| | |||||||| | ||| | | | | |||||
Sbjct 173827 AGCAAACAGGTCATCTATGACATCATCACCGATGCCGTCGCCATCGAACAAGAATTTCTA 173886
Query 22983 CCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACAT 23042
| || || || | ||||||| ||||| | | |||| | ||| ||
Sbjct 173887 AC-CGAAGCCCTGCCCTGCGCATTACTTGGCATGAACGCTACCTTGATGAAGCAGTATAT 173945
Query 23043 ACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTG- 23101
|||| ||||| || ||||| |||| || ||||| | | ||||||||| | || |
Sbjct 173946 CGAGTTCGTTGCCGACCGCCTTCTCGTCGCACTGGGCAACGAAAAGATGTA-CAGGTCGT 174004
Query 23102 CCAATCCATTTGATTTCATGGATAACAT-TAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160
| ||||| |||||||||||||| ||||| | || | | || ||||| ||||| || |||
Sbjct 174005 CAAATCCCTTTGATTTCATGGAAAACATATCGC-TAGGGGGCAAAACCAACTTTTTCGAA 174063
Query 23161 CGCCGTGTGAGTGAATATCAG 23181
|| || |||| ||||||
Sbjct 174064 AAGCGGGTTGGTGACTATCAG 174084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356231090556934
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |