Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq69 165 1e-35
seq24 165 1e-35
>seq69
Length=174959
Score = 165 bits (182), Expect = 1e-35
Identities = 337/490 (69%), Gaps = 13/490 (3%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT-TGGCACGCGGA 96934
||||||||||| || |||||||| || | ||| | ||| |||| || ||||| || ||
Sbjct 173299 CAGGGCGGCAACAAGCGGCCAGGTGCCTTTGCCATATACCTGGAGCCAATGGCATGCTGA 173240
Query 96935 CGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGA 96994
|| ||||| ||| | || ||||||| ||| |||| || |||| ||||| | ||
Sbjct 173239 TGTCTTTGAGTTTCTGGATTTGCGCAAGAACCATGGCAAGGAGGAGGTTCGAGCTCGCGA 173180
Query 96995 CTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAACGACGGTGG 97051
| | || | || || ||| | || || |||||||||||||||| || ||||||
Sbjct 173179 CCTCTTCTTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGAAAAACGGTG- 173121
Query 97052 CTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGA 97111
| |||| || ||||||||| || | ||||||||| |||| |||| ||||| ||
Sbjct 173120 --ATTGGACGCTCATGTGCCCCAACGAATGTCCCGGTCTGGCCGACTGCTACGGCGATGA 173063
Query 97112 GTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATG 97170
|||||||| |||| ||||||| |||||||| || ||||| || |
Sbjct 173062 ATTTGAGGCTCTGTACGAAAAGTACGAGCGCGAGGGCCGTGGCCGCAAGACG-GTGCGGG 173004
Query 97171 CACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229
| | |||| |||||| | | ||| || | ||| || || || | |||| |||
Sbjct 173003 CTC-AGAAGCTGTGGTATTCTATCCTGGAAGTACAGACGGAAACGGGCAACCCGTTCATG 172945
Query 97230 CTCTACAAGGATACCGTG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGG 97288
|| ||||||||| | || || ||||| ||||| ||| || |||||||||| | |
Sbjct 172944 CTGTACAAGGAT-CATTGCAACCGCAAGAGCAATCAAAAGAACCTGGGCACCATTCGGAG 172886
Query 97289 CTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGT 97348
|| || || ||||||||||| || |||||| | | || || || || || |||
Sbjct 172885 TTCGAACCTTTGCACGGAAATCGTTGAGTACTCTGCACCTGATGAAGTTGCTGTCTGCAA 172826
Query 97349 TCTGGCATCG 97358
|||||| |||
Sbjct 172825 TCTGGCCTCG 172816
>seq24
Length=328731
Score = 165 bits (182), Expect = 1e-35
Identities = 347/506 (69%), Gaps = 31/506 (6%)
Strand=Plus/Plus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| || |||||||| | |||| || || |||||| | ||| | || || |||| ||
Sbjct 173581 ATTCGCAAAAAGGCCGACTGGGCTATACGCTGGATCCAGGACAAAAACTCATCGTTTGCT 173640
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| | ||||||| || ||||| || ||||| ||||||||| ||| ||||| ||
Sbjct 173641 CAACGCTTGGTGGCCTTTGCCGCGGTCGAGGGTATCTTCTTTAGTGGTGCCTTTGCCTCC 173700
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| |||||||||||||| || |||||||| || |||| ||||| | ||
Sbjct 173701 ATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTTTCCAACGAACTCATT 173760
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTG-TTTCGCAACTATCTGCG 125599
|| ||||| || || | ||| |||||||| ||| ||| ||||| ||
Sbjct 173761 TCGCGAGATGAAGGTTTGCACACGGACTTTGCATGTCTCCTGCACTCGCACCT------- 173813
Query 125600 TCCCGAGTGCAGATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAG 125656
| | | | ||||| || |||||||| |||| | |||||||||||
Sbjct 173814 ---CAAAAACCGGGCCAGC---AAACAGGTCATCTATGACATCATCACCGATGCCGTCGC 173867
Query 125657 GATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGA-TTGGCATGAACTGCA 125715
|| |||||||| |||||||||||| |||| || | |||| | ||||||||||| ||
Sbjct 173868 CATCGAACAAGAATTTCTAACCGAAGCCCTGCC-CTGCGCATTACTTGGCATGAAC-GCT 173925
Query 125716 AGC-TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC 125774
| | | ||| |||| || ||||| || || || || || || || || |||
Sbjct 173926 ACCTTGATGAAGCAGTATATCGAGTTCGTTGCCGACCGCCTTCTCGTCGCACTG---GGC 173982
Query 125775 --CG-CAAGATTTACA--ACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAG 125829
|| ||||| |||| || || |||||||||||||||||| | |||||| ||||
Sbjct 173983 AACGAAAAGATGTACAGGTCGTCA--AATCCCTTTGATTTCATGGAAAACATATCGCTAG 174040
Query 125830 AGGGTAAGACCAACTTTTTCGAGAAG 125855
||| || |||||||||||||| |||
Sbjct 174041 GGGGCAAAACCAACTTTTTCGAAAAG 174066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741053845847280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |