Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq12 82.4 5e-11
>seq12
Length=470578
Score = 82.4 bits (90), Expect = 5e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
|||| ||| | ||||| || ||||| || ||||||||||| || | | ||
Sbjct 224327 CGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATATTGTAATCGCTCAGAGTACGTCCA 224268
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||| ||| ||||| |||||| | || || ||||| | ||| |||||||| ||
Sbjct 224267 TCTTCCAGTTGTTTTCCGGCAAATATGAGGCGCTGTTGGTCGGGGGGAATGCCTTCCTTG 224208
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| || | || || | | |||||| || | || ||| |||| ||| |||
Sbjct 224207 TCTTGTATTTTCGACTTCACATTGTCAATCGTATCCGAAGATTCAACTTCCAAAGTAATC 224148
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| |||||||| | ||| || ||||| ||||||||
Sbjct 224147 GTCTTTCCCGTCAAAGTCTTGACGAATATTTGCAT 224113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318775354411044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |