Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq70 113 4e-20
seq12 102 7e-17
>seq70
Length=137430
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| || | ||||| ||| ||||| || | |||||| ||||||| || | |
Sbjct 82967 CGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGTATGTTATAGTCGCTCAGGGTTCGGCCA 82908
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| || ||||| |||||| ||||||| | | ||||| || || ||||| || || |||
Sbjct 82907 TCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTG 82848
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| || | ||||||| | ||| ||||||| || || |||| |||||
Sbjct 82847 TCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGAGTGATT 82788
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || ||||| ||||||||||||||
Sbjct 82787 GTCTTCCCTGTGAGGGTTTTGACAAAGATCTGCAT 82753
>seq12
Length=470578
Score = 102 bits (112), Expect = 7e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || || || | ||| |||| || | || | ||||| ||||| || | ||| |
Sbjct 223891 TTTGCATACCGCCGCGCAAGCGCAGGACAAGATGTAGTGTAGACTCCTTCTGAATGTTGT 223832
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
| ||| || || || |||||||| |||||||||| ||||||| || | ||| ||||
Sbjct 223831 AGTCGGACAAGGTCCTGCCATCCTCCAACTGTTTTCCGGCAAAGATCAAGCGTTGTTGAT 223772
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
| ||||||||||| || ||||| | || || | ||||||| | | ||||| || |
Sbjct 223771 CGGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTATCAATAGTGTTAGAGG 223712
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
|| || || | ||||| || ||||||||
Sbjct 223711 ACTCTACCTCTAGGGTGATCGTCTTTCCAGT 223681
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || || || | ||| || | || | |||||| || || || || || | ||| |
Sbjct 224119 TTTGCATACCGCCGCGCAAACGAAGGACAAGGTGCAACGTGGACTCTTTCTGGATGTTGT 224060
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
||||| || ||| | |||||| ||||| || || ||||||| | | || ||||
Sbjct 224059 AATCGGACAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGAT 224000
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
| || |||||||| || ||||| | ||||| | ||| || ||| ||||| |
Sbjct 223999 CAGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTTCACATTATCGATGGTGTCGGACG 223940
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || | ||||| || || ||||| | || ||||||||||| |||||
Sbjct 223939 ATTCGACTTCCAAAGTGATCGTCTTGCCAGTTAATGTCTTCACAAAGATTTGCAT 223885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448287961096080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |