Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq70 86.0 6e-12 seq12 82.4 7e-11 >seq70 Length=137430 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | ||||| ||||| | || || || | ||||| | || | || || Sbjct 82749 CAAGATGCAGATCTTTGTCAAAACCCTCACAGGGAAGACAATCACTCTTGAGGTGGAGTC 82808 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 ||||||||||| | ||||| |||||| ||||| || || || || ||||| Sbjct 82809 TTCTGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGA 82868 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || | ||||| | | ||| || || |||||||||| ||| | | |||||||| Sbjct 82869 CCAGCAGCGCCTCATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGAACCCTGAGCGACTA 82928 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||||| || || || ||| | || || |||||| Sbjct 82929 TAACATACAGAAGGAGAGCACTCTGCACCTCGTCCTG 82965 >seq12 Length=470578 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846 ||| | |||||||| |||||||| | || |||| || |||| || || | ||| Sbjct 223675 ACAGTCACTGGAAAGACGATCACCCTAGAGGTAGAGTCCTCTAACACTATTGATAACGTC 223734 Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906 || ||||| ||||| || || || ||||||||||||||| | | || | | | Sbjct 223735 AAGTCCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAACAACGCTTGATCTTTGCC 223794 Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966 || ||||| | || |||| || | | | |||||| |||||||| || || ||||| Sbjct 223795 GGAAAACAGTTGGAGGATGGCAGGACCTTGTCCGACTACAACATTCAGAAGGAGTCTACA 223854 Query 26967 ATCCATCTGGTCCTG 26981 | ||||| |||||| Sbjct 223855 CTACATCTTGTCCTG 223869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478658941664160