Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq69 322 1e-82 >seq69 Length=174959 Score = 322 bits (356), Expect = 1e-82 Identities = 1019/1559 (65%), Gaps = 33/1559 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || || |||| | ||| ||| ||||| || | | | || |||| || Sbjct 173569 TTCACCCATGCGTCGCCGGCGCTGTTCAACGCTGGCACGCCTCAGTGCCAACTGTCCTCG 173510 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || ||||||||| || | ||||| || |||| Sbjct 173509 TGCTTCCTCGTTGACATGAAGGATGACAGCATCGAGGGCATTTACGACACGCTCAAGACG 173450 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 || || | || || |||| || || || || || | | || | || | ||||| Sbjct 173449 TGCGCCATGATCTCTAAGATGGCCGGTGGCATCGGGCTCAACG-TGCATCGGATCCGTGC 173391 Query 363726 -ACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 || | | || |||| |||||| | |||| |||||| || | ||||||||||| Sbjct 173390 TACCGG-CTCTTGCATTGCCGGCACCAACGGGAC-CTCGAACGGTGTCATTCCCATGCTT 173333 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 ||||| ||| |||| || || | |||||||||||||| || ||||| ||| || Sbjct 173332 CGTGTCTTTAACAACACGGCCCGCTACGTCGACCAGGGCGGCAACAAGCGGCCAGGTGCC 173273 Query 363844 TTTGCTATGTATCTCGAGCCTCAT--CATGCCGATATTTTTGAGTTTCTTGAGCTCCGGA 363901 ||||| || || || ||||| || ||||| ||| | ||||||||||| || | || | Sbjct 173272 TTTGCCATATACCTGGAGCCA-ATGGCATGCTGATGTCTTTGAGTTTCTGGATTTGCGCA 173214 Query 363902 AAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTG 363961 | ||| || || ||||| | || || || || || |||| || || ||| || | | Sbjct 173213 AGAACCATGGCAAGGAGGAGGTTCGAGCTCGCGACCTCTTCTTAGCCCTGTGGATTCCCG 173154 Query 363962 ACCATTTTATGAAGCGCGTGGAGGCA---GGTAAGAATTGGTCACTCTTTTGCCCACACG 364018 ||| || ||||||||||||||| | ||| | |||| | ||| | ||||| ||| Sbjct 173153 ACCTGTTCATGAAGCGCGTGGAGAAAAACGGTGA---TTGGACGCTCATGTGCCCCAACG 173097 Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078 ||||||| ||||| |||| | || || || | || ||||| ||||||||||| | Sbjct 173096 AATGTCCCGGTCTGGCCGACTGCTACGGCGATGAATTTGAGGCTCTGTACGAAAAGTACG 173037 Query 364079 AATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGG 364138 | ||||| | || ||||| | | || |||||||| |||| | | ||| ||| Sbjct 173036 AGCGCGAGGGCCGTGGCCGCAAGACGGTGCGGGCTCAGAAGCTGTGGTATTCTATCCTGG 172977 Query 364139 ATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGT 364198 | |||| || || || | || | ||| ||||||| ||| |||||||||||| Sbjct 172976 AAGTACAGACGGAAACGGGCAACCCGTTCATGCTGTACAAGGATCATTGCAACCGCAAGA 172917 Query 364199 CCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAA 364257 ||| || || |||| || || |||| | || | ||||| || || || || |||| Sbjct 172916 GCAATCAAAAGAACCTGGGCACCATTC-GGAGTTCGAACCTTTGCACGGAAATCGTTGAG 172858 Query 364258 TACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT 364317 ||| | || || || || ||| || || || || || ||| | || || || || || Sbjct 172857 TACTCTGCACCTGATGAAGTTGCTGTCTGCAATCTGGCCTCGCTAGCCCTGCCTGCCTTC 172798 Query 364318 GTAAAAGATG----GTACT--TTTGACCACCAGCATCTTTATGACGTAACCTA--TCATG 364369 || | ||| | || | ||| |||| | || | || || || | || | Sbjct 172797 GTCGACTATGACCAGGGCTGCTACGACTTCCAGAAGCTCCACGAGGTGACGCAGGTCGTC 172738 Query 364370 CTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGC 364429 | | | || ||| | | | | |||||| || |||| ||| || || ||| | Sbjct 172737 GTCC--GTAACCTCAATAGGATCATCGACGTCAACCATTACCCAGTTGAAGAGGCCCAAA 172680 Query 364430 GTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTA 364489 || ||||| || || ||||||||| ||||||| |||||||| ||||| | |||| Sbjct 172679 ACAGCAACATGCGCCACCGACCGATTGGTGTTGGTGTCCAGGGCCTGGCTGATGCTTTTC 172620 Query 364490 TGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTG 364549 || ||| ||| | ||||| || || || || || | ||||| || | || || | Sbjct 172619 TGGCTCTCCGCATGCCGTTTGAGTCTCCGGAGGCCCGGGAGCTAAACCAGAAAATATTCG 172560 Query 364550 AAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGT 364609 | || || || ||||| ||||||| || || ||||||| | | | || | Sbjct 172559 AGACCATCTACCACGCCGCGTTGACTGCCTCAATGGAGCTGGCAAAGAGCGAAGGGCCCT 172500 Query 364610 ACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATG 364669 |||| | | | | || || ||| ||| |||| ||||||||||| | ||||| | Sbjct 172499 ACTCGTCGTTTAAAGGATCGCCTGCGTCGGAGGGCGTGCTCCAGTTTGATATGTGGAAGG 172440 Query 364670 TCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTA 364729 | | ||| || | | ||| | ||||| ||||| || | | ||| || |||| | Sbjct 172439 TGAAGCCTTCAGAGCTCTGGGAGTGGGAAACGCTCCGGGAGCAGATCAAGGAGTATGGCA 172380 Query 364730 CTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAA 364789 |||||| || | || || ||||| ||||| || | || ||||| || | Sbjct 172379 TACGCAACAGTCTGCTGGTGGCCCCTATGCCGACGGCCAGCACGTCGCAAATCCTTGGCA 172320 Query 364790 ACAACGAGTGCTTCGAACCGTTTACAAG--CAATCTTTATTCACGCCGGGTTCTTTCCGG 364847 |||||||||||||||| || ||||| | ||| | || || || || || | || Sbjct 172319 ACAACGAGTGCTTCGAGCC--TTACACGTCCAACATCTACCAGCGACGCGTACTGGCGGG 172262 Query 364848 AGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGG 364907 || || | ||| || || | || |||||||||| |||| || | ||| Sbjct 172261 CGAGTTCCAGGTGGTCAACCCCTGGCTGCTCAAGGATCTGGTCGACTTGGGCTTATGGTC 172202 Query 364908 TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATT 364967 ||| ||||||||| ||||| || | || || || | |||||||| || | Sbjct 172201 GGACGCGATGAAGAACCGAATCATTGCGGAAAACGGGTCCATACAGAACATCCCCAACAT 172142 Query 364968 TCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCAT 365027 || | || | || | ||||||| ||||| ||||| ||||| |||| | | Sbjct 172141 CCCCGCCGACGTCAAAGCACTTTACAAGACCGTCTGGGAGATTTCGCAGCGACAGGTGGT 172082 Query 365028 TGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086 | ||||||||||| || |||||||||||| ||| ||||||| | ||| ||||| Sbjct 172081 GCAGATGGCGGCCGACCGGGGTGCTTTTATCGACCAGTCCCAGTCGCTCAAC--ATTCA 172025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303343947851996