Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq69 322 1e-82
>seq69
Length=174959
Score = 322 bits (356), Expect = 1e-82
Identities = 1019/1559 (65%), Gaps = 33/1559 (2%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| || || |||| | ||| ||| ||||| || | | | || |||| ||
Sbjct 173569 TTCACCCATGCGTCGCCGGCGCTGTTCAACGCTGGCACGCCTCAGTGCCAACTGTCCTCG 173510
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | |||||||| || ||||||||| || | ||||| || ||||
Sbjct 173509 TGCTTCCTCGTTGACATGAAGGATGACAGCATCGAGGGCATTTACGACACGCTCAAGACG 173450
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
|| || | || || |||| || || || || || | | || | || | |||||
Sbjct 173449 TGCGCCATGATCTCTAAGATGGCCGGTGGCATCGGGCTCAACG-TGCATCGGATCCGTGC 173391
Query 363726 -ACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783
|| | | || |||| |||||| | |||| |||||| || | |||||||||||
Sbjct 173390 TACCGG-CTCTTGCATTGCCGGCACCAACGGGAC-CTCGAACGGTGTCATTCCCATGCTT 173333
Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843
||||| ||| |||| || || | |||||||||||||| || ||||| ||| ||
Sbjct 173332 CGTGTCTTTAACAACACGGCCCGCTACGTCGACCAGGGCGGCAACAAGCGGCCAGGTGCC 173273
Query 363844 TTTGCTATGTATCTCGAGCCTCAT--CATGCCGATATTTTTGAGTTTCTTGAGCTCCGGA 363901
||||| || || || ||||| || ||||| ||| | ||||||||||| || | || |
Sbjct 173272 TTTGCCATATACCTGGAGCCA-ATGGCATGCTGATGTCTTTGAGTTTCTGGATTTGCGCA 173214
Query 363902 AAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTG 363961
| ||| || || ||||| | || || || || || |||| || || ||| || | |
Sbjct 173213 AGAACCATGGCAAGGAGGAGGTTCGAGCTCGCGACCTCTTCTTAGCCCTGTGGATTCCCG 173154
Query 363962 ACCATTTTATGAAGCGCGTGGAGGCA---GGTAAGAATTGGTCACTCTTTTGCCCACACG 364018
||| || ||||||||||||||| | ||| | |||| | ||| | ||||| |||
Sbjct 173153 ACCTGTTCATGAAGCGCGTGGAGAAAAACGGTGA---TTGGACGCTCATGTGCCCCAACG 173097
Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078
||||||| ||||| |||| | || || || | || ||||| ||||||||||| |
Sbjct 173096 AATGTCCCGGTCTGGCCGACTGCTACGGCGATGAATTTGAGGCTCTGTACGAAAAGTACG 173037
Query 364079 AATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGG 364138
| ||||| | || ||||| | | || |||||||| |||| | | ||| |||
Sbjct 173036 AGCGCGAGGGCCGTGGCCGCAAGACGGTGCGGGCTCAGAAGCTGTGGTATTCTATCCTGG 172977
Query 364139 ATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGT 364198
| |||| || || || | || | ||| ||||||| ||| ||||||||||||
Sbjct 172976 AAGTACAGACGGAAACGGGCAACCCGTTCATGCTGTACAAGGATCATTGCAACCGCAAGA 172917
Query 364199 CCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAA 364257
||| || || |||| || || |||| | || | ||||| || || || || ||||
Sbjct 172916 GCAATCAAAAGAACCTGGGCACCATTC-GGAGTTCGAACCTTTGCACGGAAATCGTTGAG 172858
Query 364258 TACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT 364317
||| | || || || || ||| || || || || || ||| | || || || || ||
Sbjct 172857 TACTCTGCACCTGATGAAGTTGCTGTCTGCAATCTGGCCTCGCTAGCCCTGCCTGCCTTC 172798
Query 364318 GTAAAAGATG----GTACT--TTTGACCACCAGCATCTTTATGACGTAACCTA--TCATG 364369
|| | ||| | || | ||| |||| | || | || || || | || |
Sbjct 172797 GTCGACTATGACCAGGGCTGCTACGACTTCCAGAAGCTCCACGAGGTGACGCAGGTCGTC 172738
Query 364370 CTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGC 364429
| | | || ||| | | | | |||||| || |||| ||| || || ||| |
Sbjct 172737 GTCC--GTAACCTCAATAGGATCATCGACGTCAACCATTACCCAGTTGAAGAGGCCCAAA 172680
Query 364430 GTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTA 364489
|| ||||| || || ||||||||| ||||||| |||||||| ||||| | ||||
Sbjct 172679 ACAGCAACATGCGCCACCGACCGATTGGTGTTGGTGTCCAGGGCCTGGCTGATGCTTTTC 172620
Query 364490 TGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTG 364549
|| ||| ||| | ||||| || || || || || | ||||| || | || || |
Sbjct 172619 TGGCTCTCCGCATGCCGTTTGAGTCTCCGGAGGCCCGGGAGCTAAACCAGAAAATATTCG 172560
Query 364550 AAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGT 364609
| || || || ||||| ||||||| || || ||||||| | | | || |
Sbjct 172559 AGACCATCTACCACGCCGCGTTGACTGCCTCAATGGAGCTGGCAAAGAGCGAAGGGCCCT 172500
Query 364610 ACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATG 364669
|||| | | | | || || ||| ||| |||| ||||||||||| | ||||| |
Sbjct 172499 ACTCGTCGTTTAAAGGATCGCCTGCGTCGGAGGGCGTGCTCCAGTTTGATATGTGGAAGG 172440
Query 364670 TCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTA 364729
| | ||| || | | ||| | ||||| ||||| || | | ||| || |||| |
Sbjct 172439 TGAAGCCTTCAGAGCTCTGGGAGTGGGAAACGCTCCGGGAGCAGATCAAGGAGTATGGCA 172380
Query 364730 CTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAA 364789
|||||| || | || || ||||| ||||| || | || ||||| || |
Sbjct 172379 TACGCAACAGTCTGCTGGTGGCCCCTATGCCGACGGCCAGCACGTCGCAAATCCTTGGCA 172320
Query 364790 ACAACGAGTGCTTCGAACCGTTTACAAG--CAATCTTTATTCACGCCGGGTTCTTTCCGG 364847
|||||||||||||||| || ||||| | ||| | || || || || || | ||
Sbjct 172319 ACAACGAGTGCTTCGAGCC--TTACACGTCCAACATCTACCAGCGACGCGTACTGGCGGG 172262
Query 364848 AGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGG 364907
|| || | ||| || || | || |||||||||| |||| || | |||
Sbjct 172261 CGAGTTCCAGGTGGTCAACCCCTGGCTGCTCAAGGATCTGGTCGACTTGGGCTTATGGTC 172202
Query 364908 TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATT 364967
||| ||||||||| ||||| || | || || || | |||||||| || |
Sbjct 172201 GGACGCGATGAAGAACCGAATCATTGCGGAAAACGGGTCCATACAGAACATCCCCAACAT 172142
Query 364968 TCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCAT 365027
|| | || | || | ||||||| ||||| ||||| ||||| |||| | |
Sbjct 172141 CCCCGCCGACGTCAAAGCACTTTACAAGACCGTCTGGGAGATTTCGCAGCGACAGGTGGT 172082
Query 365028 TGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086
| ||||||||||| || |||||||||||| ||| ||||||| | ||| |||||
Sbjct 172081 GCAGATGGCGGCCGACCGGGGTGCTTTTATCGACCAGTCCCAGTCGCTCAAC--ATTCA 172025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303343947851996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |