Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 1e-14 seq70 91.5 1e-13 >seq12 Length=470578 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || ||||||||||| || |||| || | |||||||| | | Sbjct 223885 ATGCAAATCTTTGTGAAGACATTAACTGGCAAGACGATCACTTTGGAAGTCGAATCGTCC 223944 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || || || ||||| || || || || || |||||| Sbjct 223945 GACACCATCGATAATGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCTGATCAA 224004 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | | |||||||| || || |||| | ||| | |||||| ||| Sbjct 224005 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTGTCCGATTACAAC 224064 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| || || Sbjct 224065 ATCCAGAAAGAGTCCAC 224081 >seq70 Length=137430 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 23973 ACTTTTTAG-CCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTAC 24031 || ||| || ||| ||| ||||| | ||||| ||||| | || || || | || || Sbjct 82734 ACCTTTGAGACCAGGCAAGATGCAGATCTTTGTCAAAACCCTCACAGGGAAGACAATCAC 82793 Query 24032 CATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGA 24091 | || || ||| | ||||||||||| | ||||| |||||| ||||| || Sbjct 82794 TCTTGAGGTGGAGTCTTCTGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGA 82853 Query 24092 AGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG 24151 ||||| || ||||| || ||| | || || | | ||| ||||| |||||||||| | | Sbjct 82854 GGGCATTCCCCCCGACCAGCAGCGCCTCATCTTTGCCGGAAAGCAGCTCGAAGATGGCCG 82913 Query 24152 AAACGTCAGCGATTATAACATTCAAAAAGA 24181 || | | ||||| |||||||| || || || Sbjct 82914 AACCCTGAGCGACTATAACATACAGAAGGA 82943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429932971369590