Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq12 95.1 1e-14
seq70 91.5 1e-13
>seq12
Length=470578
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || ||||||||||| || |||| || | |||||||| | |
Sbjct 223885 ATGCAAATCTTTGTGAAGACATTAACTGGCAAGACGATCACTTTGGAAGTCGAATCGTCC 223944
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | || || || || ||||| || || || || || ||||||
Sbjct 223945 GACACCATCGATAATGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCTGATCAA 224004
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | | |||||||| || || |||| | ||| | |||||| |||
Sbjct 224005 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTGTCCGATTACAAC 224064
Query 24171 ATTCAAAAAGAATCTAC 24187
|| || ||||| || ||
Sbjct 224065 ATCCAGAAAGAGTCCAC 224081
>seq70
Length=137430
Score = 91.5 bits (100), Expect = 1e-13
Identities = 147/210 (70%), Gaps = 1/210 (0%)
Strand=Plus/Plus
Query 23973 ACTTTTTAG-CCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTAC 24031
|| ||| || ||| ||| ||||| | ||||| ||||| | || || || | || ||
Sbjct 82734 ACCTTTGAGACCAGGCAAGATGCAGATCTTTGTCAAAACCCTCACAGGGAAGACAATCAC 82793
Query 24032 CATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGA 24091
| || || ||| | ||||||||||| | ||||| |||||| ||||| ||
Sbjct 82794 TCTTGAGGTGGAGTCTTCTGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGA 82853
Query 24092 AGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG 24151
||||| || ||||| || ||| | || || | | ||| ||||| |||||||||| | |
Sbjct 82854 GGGCATTCCCCCCGACCAGCAGCGCCTCATCTTTGCCGGAAAGCAGCTCGAAGATGGCCG 82913
Query 24152 AAACGTCAGCGATTATAACATTCAAAAAGA 24181
|| | | ||||| |||||||| || || ||
Sbjct 82914 AACCCTGAGCGACTATAACATACAGAAGGA 82943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429932971369590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |