Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq24 102 9e-17
>seq24
Length=328731
Score = 102 bits (112), Expect = 9e-17
Identities = 195/287 (68%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
|| || |||||||| | || || || | || || |||| |||||||| ||| ||
Sbjct 173459 ATATAGGTATCGATCAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATAATCTGA 173400
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481
||||||||||| || | || || | |||||| || || || | ||| || |
Sbjct 173399 AATCCGTAGAAGCAACGGGCCTCGGGGATCTGAACCTCGCCGCTGAACCGCTCAACCAAG 173340
Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541
||||||||||| || || || || || || ||||| |||| || || | |||||
Sbjct 173339 TTTTCATTGACGATGCCGTCCGAGGCGGCGAAAAAGGCCAGGATGTGGGACACAAAATAC 173280
Query 93542 TTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598
|| || ||||| || | | || | ||| || | || || || ||||| | |||
Sbjct 173279 TTTTCGTCATCATTCAGGCGGTTGTTCCAGTCATGCAAGTCCTTGGAGAGATCTATTTCC 173220
Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645
||| | |||||||| || || ||||| || |||||||| | ||| ||
Sbjct 173219 TCGGCTGTCCAAAATGAGGCCTCTGCCTTCTTGTACATTTGCCAAAT 173173
Score = 96.9 bits (106), Expect = 4e-15
Identities = 156/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151
|| |||||||| || || |||||||| ||||| || || | || ||| || || ||
Sbjct 173795 CATGCAAAGTCCGTGTGCAAACCTTCATCTCGCGAAATGAGTTCGTTGGAAAAGGTCAAG 173736
Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
|| || | || || || ||||||||||| || || || ||||| |||| ||| ||
Sbjct 173735 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTAAAGAAG 173676
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT- 93270
||||| || || || ||||| ||||| | |||| ||||| || | || | ||
Sbjct 173675 ATACCCTCGACCGCGGCAAAGGCCACCAAGCGTTGAGCAAACGATG-AGTTTTTGTCCTG 173617
Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312
|||||| || |||||| ||||| ||||| ||| |||||
Sbjct 173616 GATCCAGCGTATAGCCCAGTCGGCCTTTTTGCGAATGCAAGG 173575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556856776680720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |