Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq16 104 5e-17
>seq16
Length=747691
Score = 104 bits (114), Expect = 5e-17
Identities = 166/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219
||| || |||| ||||| || || || ||||| ||||| ||||| || ||||| |||||
Sbjct 374128 CTCTCGTATTGCAGTCATCGGCCCGAACGGTGCTGGTAAATCTACTCTGATCAACGTCCT 374069
Query 280220 GACTGGCGAGACCCAGGCCA-CTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGG 280278
|| || ||| | || ||| ||||||| ||| ||||| ||||| || || |
Sbjct 374068 TACCGGTGAG-CTCATTCCAACTGAGGGTGAGATTTACCAGCATGAGAACATCCGCATCG 374010
Query 280279 CTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACC 280338
| ||| | ||||| |||||| |||||||| || || |||||| ||| ||| |
Sbjct 374009 CCTACATTAAGCAGCATGCTTTCGCTCACATCGACAATCATTTGGACAAGACGCCTTTCG 373950
Query 280339 AATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
|||| ||||||||||| | | || | ||| |||||| ||| || |||| ||
Sbjct 373949 AATATATTCAGTGGCGAT-TCCAGACTGGTGAGGATCGCGAGACGATGGACCG 373898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027829188226098
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |