Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq16 104 5e-17 >seq16 Length=747691 Score = 104 bits (114), Expect = 5e-17 Identities = 166/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| ||||| || || || ||||| ||||| ||||| || ||||| ||||| Sbjct 374128 CTCTCGTATTGCAGTCATCGGCCCGAACGGTGCTGGTAAATCTACTCTGATCAACGTCCT 374069 Query 280220 GACTGGCGAGACCCAGGCCA-CTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGG 280278 || || ||| | || ||| ||||||| ||| ||||| ||||| || || | Sbjct 374068 TACCGGTGAG-CTCATTCCAACTGAGGGTGAGATTTACCAGCATGAGAACATCCGCATCG 374010 Query 280279 CTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACC 280338 | ||| | ||||| |||||| |||||||| || || |||||| ||| ||| | Sbjct 374009 CCTACATTAAGCAGCATGCTTTCGCTCACATCGACAATCATTTGGACAAGACGCCTTTCG 373950 Query 280339 AATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 |||| ||||||||||| | | || | ||| |||||| ||| || |||| || Sbjct 373949 AATATATTCAGTGGCGAT-TCCAGACTGGTGAGGATCGCGAGACGATGGACCG 373898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027829188226098