Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 3e-21
seq14 82.4 6e-11
>seq12
Length=470578
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 114191 TTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTA 114250
|||||| ||||| ||||||||||||| |||||| |||||| |||||||| || || |
Sbjct 224304 TTCTTTCTGAATATTGTAATCGCTCAGAGTACGTCCATCTTCCAGTTGTTTTCCGGCAAA 224245
Query 114251 GATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG 114310
||||| ||||||||||| || ||||||||||| ||||| || || || | |
Sbjct 224244 TATGAGGCGCTGTTGGTCGGGGGGAATGCCTTCCTTGTCTTGTATTTTCGACTTCACATT 224185
Query 114311 TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370
|||| || || | ||||| || |||| || | ||| || || |||| ||| || ||
Sbjct 224184 GTCAATCGTATCCGAAGATTCAACTTCCAAAGTAATCGTCTTTCCCGTCAAAGTCTTGAC 224125
Query 114371 AAAAATCTGCAT 114382
|| || |||||
Sbjct 224124 GAATATTTGCAT 224113
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244
||| || ||||| || |||||||||||| || ||| || ||| ||||| || || ||
Sbjct 224082 CGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCGGCCATCCTCAAGCTGCTTGCC 224023
Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304
||| |||| || |||||||| || || ||||| || || ||||| || || ||
Sbjct 224022 AGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTT 223963
Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | || | |||||||| |||||||| |||| || | ||| ||||| || | ||
Sbjct 223962 CACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTGATCGTCTTGCCAGTTAATGT 223903
Query 114365 TTTTACAAAAATCTGCAT 114382
|| ||||| || |||||
Sbjct 223902 CTTCACAAAGATTTGCAT 223885
>seq14
Length=772799
Score = 82.4 bits (90), Expect = 6e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
||||| |||||||||||| || || || ||||||||| || || || ||| ||||
Sbjct 69850 TTTTGGATGTTGTAATCGGACAGGGTTCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATC 69909
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
|| || ||||| ||||||||||| | || || || |||||| ||| | | ||
Sbjct 69910 AGTCGTTGTTGATCCGGAGGAATAACCTCCTTATCCTGAATCTTGGATTTAAAGTTATCG 69969
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
| || || | || ||||| || | ||| | |||||||| || || || || || |||
Sbjct 69970 ATCGTTTCCGACGACTCGACCTCGAGGGTGATGGTTTTGCCCGTTAGGGTCTTGACGAAA 70029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420131440415736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |