Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq12 116 3e-21 seq14 82.4 6e-11 >seq12 Length=470578 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 114191 TTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTA 114250 |||||| ||||| ||||||||||||| |||||| |||||| |||||||| || || | Sbjct 224304 TTCTTTCTGAATATTGTAATCGCTCAGAGTACGTCCATCTTCCAGTTGTTTTCCGGCAAA 224245 Query 114251 GATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG 114310 ||||| ||||||||||| || ||||||||||| ||||| || || || | | Sbjct 224244 TATGAGGCGCTGTTGGTCGGGGGGAATGCCTTCCTTGTCTTGTATTTTCGACTTCACATT 224185 Query 114311 TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 |||| || || | ||||| || |||| || | ||| || || |||| ||| || || Sbjct 224184 GTCAATCGTATCCGAAGATTCAACTTCCAAAGTAATCGTCTTTCCCGTCAAAGTCTTGAC 224125 Query 114371 AAAAATCTGCAT 114382 || || ||||| Sbjct 224124 GAATATTTGCAT 224113 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || ||||| || |||||||||||| || ||| || ||| ||||| || || || Sbjct 224082 CGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCGGCCATCCTCAAGCTGCTTGCC 224023 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| |||| || |||||||| || || ||||| || || ||||| || || || Sbjct 224022 AGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTT 223963 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | |||||||| |||||||| |||| || | ||| ||||| || | || Sbjct 223962 CACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTGATCGTCTTGCCAGTTAATGT 223903 Query 114365 TTTTACAAAAATCTGCAT 114382 || ||||| || ||||| Sbjct 223902 CTTCACAAAGATTTGCAT 223885 >seq14 Length=772799 Score = 82.4 bits (90), Expect = 6e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 ||||| |||||||||||| || || || ||||||||| || || || ||| |||| Sbjct 69850 TTTTGGATGTTGTAATCGGACAGGGTTCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATC 69909 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 || || ||||| ||||||||||| | || || || |||||| ||| | | || Sbjct 69910 AGTCGTTGTTGATCCGGAGGAATAACCTCCTTATCCTGAATCTTGGATTTAAAGTTATCG 69969 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 | || || | || ||||| || | ||| | |||||||| || || || || || ||| Sbjct 69970 ATCGTTTCCGACGACTCGACCTCGAGGGTGATGGTTTTGCCCGTTAGGGTCTTGACGAAA 70029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131440415736