Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq69 309 6e-79
seq24 140 6e-28
>seq69
Length=174959
Score = 309 bits (342), Expect = 6e-79
Identities = 1011/1546 (65%), Gaps = 70/1546 (5%)
Strand=Plus/Plus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| |||||||| ||||| |||| ||| ||||| |||||||||| |||| || ||
Sbjct 172243 GTTGACCACCTGGAACTCGCCCGCCAGTACGCGTCGCTGGTAGATGTTGGACGTGTAAGG 172302
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||||| || ||| ||||||| || || |||| |||||| || |||||||| || | |||
Sbjct 172303 CTCGAAGCACTCGTTGTTGCCAAGGATTTGCGACGTGCTGGCCGTCGGCATAGGGGCCAC 172362
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269
|||||||||||| | | ||| | | || ||| | | |||| | ||| |||||
Sbjct 172363 CAGCAGACTGTTGCGTATGCCATACTCCTTGATCTGCTCCCGGAGCGTTTCCCACTCCCA 172422
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
| | || ||| | || | || |||||| |||||||| |||| |||| |
Sbjct 172423 GAGCTCTGA-AGG-CTTCACCTT-------CCACATATCAAACTGGAGCACGCCCT--CC 172471
Query 244330 GACGGGGCTG--CCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCT 244386
|||| | | || | | | || |||||| || |||| || ||||||| | |
Sbjct 172472 GACGCAGGCGATCCTTTAAACGACGAGTAGGGCCCTTCGCTCTTTGCCAGCTCCATTGAG 172531
Query 244387 CTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTT 244446
||| | | |||||| ||||||||||||||| || ||| ||| | || |||||||
Sbjct 172532 GCAGTCAACG-CGGCGTGGTAGATGGTCTCGAATATTTTCTGGTTTAGCTCCCGGGCCT- 172589
Query 244447 GCCGCAGGTG--AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504
||| || || || |||| | || || | || ||||| ||||| || ||
Sbjct 172590 -CCGGAGACTCAAACGGCATGCGGAGAGCCAGAAAAGCATCAGCCAGGCCCTGGACACCA 172648
Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTG 244564
| || || |||| ||| ||| ||||| | ||| || || |||||| ||||
Sbjct 172649 ACACCAATCGGTCGGTGGCGCATGTTGCTGTTTTGGGCCTCTTCAACTGGGTAATGGTTG 172708
Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCA--TGCGGACGACGTCGGCCAGCAGCT 244622
||||||| | | | |||||||| ||| || | |||| || ||| ||| ||
Sbjct 172709 ACGTCGATGATCCTATTGAGGTTACGGACGACGACCTGCGTC--ACCTCGTGGAGCTTCT 172766
Query 244623 GAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTC-ACAAACTCGTTGAGGGCG 244681
| |||||||| | || |||| || || || || | |||||
Sbjct 172767 GGAAGTCGTAG-------------CAGCCCTGGTCATAGTCGACGAAGGCAGGCAGGGCT 172813
Query 244682 ACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTG--GTGTACTGGACAATCTCGG 244739
| |||||| |||||||| || || || || || || | ||||| || || || |
Sbjct 172814 AGCGAGGCCAGATTGCAGACAGCAACTTCATC--AGGTGCAGAGTACTCAACGATTTCCG 172871
Query 244740 TGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGG 244799
|||| ||||| | | ||||||||||||| || |||||| |||| ||||||
Sbjct 172872 TGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTTTTGATTGCTCTTGCGGTTGCAAT 172931
Query 244800 CGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCC 244859
|||||||| |||||||| || || || || ||| | | |||| | ||
Sbjct 172932 GATCCTTGTACAGCATGAACGGGTTGCCCGTTTCCGTCTGTACTTCCAGGATAGAATACC 172991
Query 244860 AGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACA 244919
| || | | |||| |||||| |||| | |||||| |||||| |||||
Sbjct 172992 ACAGCTTCTGAGCCCGCACCGTCTTGCGGCCACGGCCCTCGCGCTCGTACTTTTCGTACA 173051
Query 244920 GGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACAT 244977
| ||||| || || ||| || ||| | || ||||| || || | ||||||||
Sbjct 173052 GAGCCTCAAATTCATCGCCGTAGCAGTCGGCCAGACCGGGACATTCGTTG--GGGCACAT 173109
Query 244978 GAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGC 245037
||| |||| || ||| | || || | || |||||| |||||||| ||||| |||||
Sbjct 173110 GAGCGTCCAATCACCGTTTTTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGGC 173169
Query 245038 CTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAA 245097
||||||||| | | | ||| ||| |||| |||||| | || |||| |||
Sbjct 173170 TAAGAAGAGGTCGCGAGCTCGAACCTCCTCCTTGCCATGGTTCTTGCGCAAATCCAGAAA 173229
Query 245098 GTCAAAGACGTCGACGTGCCA-GGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGT 245156
|||||||| || | ||||| ||||||| ||| | || | ||| || ||||||||||
Sbjct 173230 CTCAAAGACATCAGCATGCCATTGGCTCCAGGTATATGGCAAAGGCACCTGGCCGCTTGT 173289
Query 245157 TGCCTCCCTGGTCCACCATCCTCTCGAG-CGCGTTG---AAGATGCGCAGGGTAGGCACT 245212
|||| |||||||| | | | || | || |||| |||| || || | || |
Sbjct 173290 TGCCGCCCTGGTCGA----CGTAGCGGGCCGTGTTGTTAAAGACACGAAGCATGGGAATG 173345
Query 245213 ATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTG 245272
| ||||| ||| ||||||||||| ||| | | ||| | | | || | |
Sbjct 173346 ACACCGTTCGAGGTCCCGTTGGTGCCGGCAATGCAAGAGCCGGTAGCACGGA----TCCG 173401
Query 245273 ATGGAC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGT 245328
||| || | || | || ||||| ||| ||||| | |||||| |||||| ||
Sbjct 173402 ATGCACGTTGAGCCCGATGCCACCGGCCATCTTAGAGATCATGGCGCACGTCTTGAGCGT 173461
Query 245329 GTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG 245388
||| |||||||| |||||||| |||||||| | || ||||| |||||||| ||
Sbjct 173462 GTCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCAACGAGGAAGCACGAGGACAGTTG 173521
Query 245389 GGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGC-GGCTCG 245447
| || || ||| | ||||||||| | || || ||||| ||| ||| ||| |
Sbjct 173522 GCACTGAGGCGTGCCAGCGTTGAACAGCGCCGGCGACGCATGGGTGAAG-AGCTTGCTGG 173580
Query 245448 AGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGC 245507
| | || |||||| | ||| | |||||| |||||||| || || |||
Sbjct 173581 ACATGAGGTTGTACGTTTCGAGGACTCGGTCGATATTGTCGCCCCATATACCCACGGCAA 173640
Query 245508 ACCTCATGAGGGTGTGCT-GGGGCG-TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGT 245564
| ||||| |||| | |||||| || |||| || ||| | ||| |||| |
Sbjct 173641 CGCGCATGATCATGTGTTGGGGGCGCTCAACGATCTTGCCGTCGAG---CTTCAGCAGAT 173697
Query 245565 AGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTC 245610
| || ||||| || |||||||| ||||| ||| ||| ||||||
Sbjct 173698 AAGAACGCTCCAGAGTCTTGAAGCCAAAATACTGATAGTTAAAGTC 173743
>seq24
Length=328731
Score = 140 bits (154), Expect = 6e-28
Identities = 302/443 (68%), Gaps = 9/443 (2%)
Strand=Plus/Plus
Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765
|||| |||||| |||| |||||||| |||||||| || ||||| |||||||||||||
Sbjct 173648 TGGTGGCCTTTGCCGCGGTCGAGGGTATCTTCTTTAGTGGTGCCTTTGCCTCCATCTTCT 173707
Query 42766 GGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824
|||||||| || || || ||||| || | ||||| || ||||||||||| |
Sbjct 173708 GGCTCAAGAAGCGTGGCCTC-ATGCCTGGCTTGACCTTTTCCAACGAACTCATTTCGCGA 173766
Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884
|| || || |||| | ||||||||| || |||||| |||| ||||||| || |
Sbjct 173767 GATGAAGGTTTGCACACGGACTTTGCATGTCTCCTGCACTCG---CACCTCAAAAACCGG 173823
Query 42885 CCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944
|| || || || | ||||||||| || ||||| | ||||| | || ||
Sbjct 173824 GCCAGCAAACAGGTCATCTATGACATCATCACCGATGCCGTCGCCATCGAACAAGAATTT 173883
Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACC-TCATGTGCAAGTA 43003
|| || | | |||||| | | | |||||||| | | ||| | ||| ||||
Sbjct 173884 CTAACCGAAGCCCTGCCCTGCGCATTACTTGGCATGAA-CGCTACCTTGATGAAGCAGTA 173942
Query 43004 CATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACA 43062
||| ||| ||| ||||||| || || || || |||| | | ||||
Sbjct 173943 TATCGAGTTCGTTGCCGACCGCCTTCTCGTCGCA-CTGGGCAACGAAAAGATGTACAGGT 174001
Query 43063 CGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCG 43122
|| | ||||| || || ||||| ||||| ||| | | |||||| |||||||||||||
Sbjct 174002 CGTCAAATCCCTTTGATTTCATGGAAAACATATCGCTAGGGGGCAAAACCAACTTTTTCG 174061
Query 43123 AGAAGCGCGTCGCCGACTACCAG 43145
| ||||| || | ||||| |||
Sbjct 174062 AAAAGCGGGTTGGTGACTATCAG 174084
Score = 113 bits (124), Expect = 9e-20
Identities = 177/250 (71%), Gaps = 5/250 (2%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| || ||| ||||| |||||||| || || || ||||||||
Sbjct 173182 ATGTACAAGAAGGCAGAGGCCTCATTTTGGACAGCCGAGGAAATAGATCTCTCCAAGGAC 173241
Query 42369 ACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAAAAACATACT 42424
| | |||| | || | |||| || ||||||||| ||| | |||| ||
Sbjct 173242 TTGCATGACTGGAACA-ACCGCCTGAATGATGACGAAAAGTATTTTGTGTCCCACATCCT 173300
Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484
|||||| ||||||||||| |||||||| |||||||| ||| ||| ||||||
Sbjct 173301 GGCCTTTTTCGCCGCCTCGGACGGCATCGTCAATGAAAACTTGGTTGAGCGGTTCAGCGG 173360
Query 42485 AGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544
||||| ||| | ||||| || ||||||||||| || ||||| || |||||| |
Sbjct 173361 CGAGGTTCAGATCCCCGAGGCCCGTTGCTTCTACGGATTTCAGATTATGATGGAGAACAT 173420
Query 42545 GCACTCTGAG 42554
||||| |||
Sbjct 173421 CCACTCCGAG 173430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944332377149280
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