Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_009236.1
Length=36690
Score E
Sequences producing significant alignments: (Bits) Value
seq369 105 2e-18
>seq369
Length=486
Score = 105 bits (116), Expect = 2e-18
Identities = 163/228 (71%), Gaps = 5/228 (2%)
Strand=Plus/Minus
Query 5366 CGCGATGACCTGCTCGCCGCACACCGCGTGCCGCCGCAGTTGCTCGGCATCGTGCCGAGC 5425
||||||| | |||||||||| ||||| |||||||||||| | | ||| | |||||||
Sbjct 486 CGCGATGTCGTGCTCGCCGCGCACCGGGTGCCGCCGCAGCTCATGGGCCTGGTGCCGACG 427
Query 5426 AATTCGGGCGGGTTCGGCACGCCGGATA-CCGCTGCACGCGTGTTCGGGCGCAACGAAAT 5484
|| || ||||| || |||||||| |||| | || | ||||||| ||||||||| |
Sbjct 426 AACTCTGGCGGATTTGGCACGCC-GATATCGGCGTCGAAGGTGTTCGCGCGCAACGAGCT 368
Query 5485 CAGGCCGCTACAGGCACGCTTCGCCGAGCTGAACGACTGGCTCGGCGACGAGGTCGTGAG 5544
|||| | ||||| ||| || | || |||||||| ||||| ||||| ||| |
Sbjct 367 GGAGCCGTTGCAGGCCAAGTTCCTGGAAATCAATGACTGGCTGGGCGATGAGGTTGTGCG 308
Query 5545 GTTCGACGATTACGAGATTCCGCCGGCGCCGGTCGCGGCGTAGCGCGC 5592
||| | |||| ||| ||| || | || || | |||||||||
Sbjct 307 CTTCAAGCCTTACACGAT--CGCAGGGGAAGG-CGACGAGTAGCGCGC 263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117285594975472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |