Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_009236.1 Length=36690 Score E Sequences producing significant alignments: (Bits) Value seq369 105 2e-18 >seq369 Length=486 Score = 105 bits (116), Expect = 2e-18 Identities = 163/228 (71%), Gaps = 5/228 (2%) Strand=Plus/Minus Query 5366 CGCGATGACCTGCTCGCCGCACACCGCGTGCCGCCGCAGTTGCTCGGCATCGTGCCGAGC 5425 ||||||| | |||||||||| ||||| |||||||||||| | | ||| | ||||||| Sbjct 486 CGCGATGTCGTGCTCGCCGCGCACCGGGTGCCGCCGCAGCTCATGGGCCTGGTGCCGACG 427 Query 5426 AATTCGGGCGGGTTCGGCACGCCGGATA-CCGCTGCACGCGTGTTCGGGCGCAACGAAAT 5484 || || ||||| || |||||||| |||| | || | ||||||| ||||||||| | Sbjct 426 AACTCTGGCGGATTTGGCACGCC-GATATCGGCGTCGAAGGTGTTCGCGCGCAACGAGCT 368 Query 5485 CAGGCCGCTACAGGCACGCTTCGCCGAGCTGAACGACTGGCTCGGCGACGAGGTCGTGAG 5544 |||| | ||||| ||| || | || |||||||| ||||| ||||| ||| | Sbjct 367 GGAGCCGTTGCAGGCCAAGTTCCTGGAAATCAATGACTGGCTGGGCGATGAGGTTGTGCG 308 Query 5545 GTTCGACGATTACGAGATTCCGCCGGCGCCGGTCGCGGCGTAGCGCGC 5592 ||| | |||| ||| ||| || | || || | ||||||||| Sbjct 307 CTTCAAGCCTTACACGAT--CGCAGGGGAAGG-CGACGAGTAGCGCGC 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117285594975472