Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq24 102 2e-16
>seq24
Length=328731
Score = 102 bits (112), Expect = 2e-16
Identities = 178/254 (70%), Gaps = 4/254 (2%)
Strand=Plus/Plus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| || || || | | |||| | ||||| | ||| || | || ||| |
Sbjct 173848 ATCATCACCGATGCCGTCGCCATCGAACAAGAATTTCTAACCGAAGCCCTGCCCTGC-GC 173906
Query 243562 CTTA-TTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620
||| ||||||||||| || | ||| ||||| ||||| ||||| ||||||||| |
Sbjct 173907 ATTACTTGGCATGAACGCTACCTTGATGAAGCAGTATATCGAGTTCGTTGCCGACCGCCT 173966
Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680
| || |||| || || | || || |||||| || || ||||||| || |||||
Sbjct 173967 TCTCGTCGCACTGGGCAACGAAAAGATGTACAGGTCGTCAAATCCCTTTGATTTCATGGA 174026
Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-AC 243739
||| ||||| || ||||| ||||| ||||||||||| || |||| ||||| |
Sbjct 174027 AAACATATCGCTAGGGGGCAAAACCAACTTTTTCGAAAAGCGGGTTGGTGACTATCAGAA 174086
Query 243740 GCCCTGGTGTGATG 243753
| || ||||| |||
Sbjct 174087 GGCC-GGTGTCATG 174099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102871832484300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |