Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq24 102 2e-16 >seq24 Length=328731 Score = 102 bits (112), Expect = 2e-16 Identities = 178/254 (70%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | | |||| | ||||| | ||| || | || ||| | Sbjct 173848 ATCATCACCGATGCCGTCGCCATCGAACAAGAATTTCTAACCGAAGCCCTGCCCTGC-GC 173906 Query 243562 CTTA-TTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| ||||||||||| || | ||| ||||| ||||| ||||| ||||||||| | Sbjct 173907 ATTACTTGGCATGAACGCTACCTTGATGAAGCAGTATATCGAGTTCGTTGCCGACCGCCT 173966 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | || |||| || || | || || |||||| || || ||||||| || ||||| Sbjct 173967 TCTCGTCGCACTGGGCAACGAAAAGATGTACAGGTCGTCAAATCCCTTTGATTTCATGGA 174026 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-AC 243739 ||| ||||| || ||||| ||||| ||||||||||| || |||| ||||| | Sbjct 174027 AAACATATCGCTAGGGGGCAAAACCAACTTTTTCGAAAAGCGGGTTGGTGACTATCAGAA 174086 Query 243740 GCCCTGGTGTGATG 243753 | || ||||| ||| Sbjct 174087 GGCC-GGTGTCATG 174099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102871832484300