Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq69 233 2e-56 seq18 87.8 2e-12 >seq69 Length=174959 Score = 233 bits (258), Expect = 2e-56 Identities = 965/1506 (64%), Gaps = 36/1506 (2%) Strand=Plus/Plus Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 ||||| ||||| || ||||| | | ||||| |||| |||||| ||||| |||||||| Sbjct 172256 AACTCGCCCGCCAGTACGCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 172315 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 ||||| || | |||||| | ||| ||| || ||||| || |||| || || ||||| Sbjct 172316 TTGTTGCCAAGGATTTGCGACGTGCTGGCCGTCGGCATAGGGGCCACCAGCAGACTGTTG 172375 Query 114035 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT- 114093 || | || | ||| | || | ||| ||| | ||||| || || |||| || Sbjct 172376 CGTATGCCATACTCCTTGATCTGCTCCCGGAGCGTTTCCCACTCCCAG---AGCTCTGAA 172432 Query 114094 --CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAAT 114151 || | ||| |||||||||||||||||| | || | || || |||||||| | ||| Sbjct 172433 GGCTTCACCTTCCACATATCAAACTGGAGCACGCCCTCCGACGCAGGCGATCCTTTAAAC 172492 Query 114152 GTCTCGTATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGA 114208 | | ||| || || || || |||| || ||| | | | || ||||| Sbjct 172493 GACGAGTAGGGCCCTTCGCTCTTTGCCAGCTCCATTGAGGCAGTC---AACGCGGCGTGG 172549 Query 114209 TACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGT 114268 || || ||||| || || || | || |||||| || ||||||| | Sbjct 172550 TAGATGGTCTCGAATATTTTCTGGTTTAGCTCCCGGGCCTCCGGAGACTCAAACGGCATG 172609 Query 114269 CGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 114328 ||| | ||| |||| || || || |||||||| | ||||| || || || | | Sbjct 172610 CGGAGAGCCAGAAAAGCATCAGCCAGGCCCTGGACACCAACACCAATCGGTCGGTGGCGC 172669 Query 114329 ATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 114388 || || ||| | || || || || ||| || ||||| | |||||| || Sbjct 172670 ATGTTGCTGTTTTGGGCCTCTTCAACTGGGTAATGGTTGACGTCGATGATCCTATTGAGG 172729 Query 114389 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 114448 || | ||| |||| || | || || ||||| | | | || | | || || Sbjct 172730 TTACGGACGACGACCTGCGTCACCTCGTGGAGCTTCTGGAAGTCGTAGCAGCCCTGGTCA 172789 Query 114449 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 | | ||| | ||| ||||| | || |||||||| || |||| ||||| Sbjct 172790 TAGTCGACGAAGGCAGGCAGGGCTAGCGAGGCCAGATTGCAGACAGCAACTTCATCAGGT 172849 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 ||| |||||| | |||||||| || | || |||||| ||||||||||| ||||||| Sbjct 172850 GCAGAGTACTCAACGATTTCCGTGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTTT 172909 Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 ||||| ||| ||| || ||||||||| |||||| | || | ||||| ||||| Sbjct 172910 TGATTGCTCTTGCGGTTGCAATGATCCTTGTACAGCATGAACGGGTTGCCCGTTTCCGTC 172969 Query 114629 TGGGACTT-GAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 114686 | | |||| || |||| | ||| | | || | || |||| || | | | || | Sbjct 172970 T-GTACTTCCAGGATAGAATACCACAGCTTCTG-AGCCCGCACCGTCTTGCGGCCACGGC 173027 Query 114687 CCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 114746 |||| |||||||||| ||| || || ||||| || || || | || | || | Sbjct 173028 CCTCGCGCTCGTACTTTTCGTACAGAGCCTCAAATTCATCGCCGTAGCAGTCGGCCAGAC 173087 Query 114747 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGA 114806 | || | | ||||| | ||| | ||| | ||| | ||| || |||||||||| Sbjct 173088 CGGGACATTCGTTGGGGCACATGAGCGTCCAATCACCGTTTTTCTCCACGCGCTTCATGA 173147 Query 114807 AGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 114866 | ||||| || ||||| || ||| ||||||| || ||| ||| | || || | || | Sbjct 173148 ACAGGTCGGGAATCCACAGGGCTAAGAAGAGGTCGCGAGCTCGAACCTCCTCCTTGCCAT 173207 Query 114867 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA-CGGTTCCAGGTACACC 114925 | || ||||| |||| ||| || | || ||| || ||||| || |||||||| | Sbjct 173208 GGTTCTTGCGCAAATCCAGAAACTCAAAGACATCAGCATGCCATTGGCTCCAGGTATATG 173267 Query 114926 GCGA------TTGACCCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTA 114979 || | || || ||| | | || |||||| || || | || ||| ||| Sbjct 173268 GCAAAGGCACCTGGCCGCTT--GTTG-CCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTA 173324 Query 114980 AATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGAC 115039 || || |||||||| ||||||| ||| | || || || || || ||| | ||| Sbjct 173325 AAGACACGAAGCATGGGAATGACACCGTTCGAGGTCCCGTTGGTGCCGGCAATGCAAGAG 173384 Query 115040 TTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 115099 | || | || ||| | || | || || || || ||| ||| ||||| Sbjct 173385 CCGGTAGCACGGATCCGATGCACGTTGAGCCCGATGCCACCGGCCATCTTAGAGATCATG 173444 Query 115100 GCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGG 115159 |||||| | |||| || |||| || || ||||| |||| |||| | | | ||| Sbjct 173445 GCGCACGTCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCAACGAGG 173504 Query 115160 AAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 ||||| |||| ||| | || || ||||||||||| || | || | ||| ||| Sbjct 173505 AAGCACGAGGACAGTTGGCACTGAGGCGTGCCAGCGTTGAACAGCGCCGGCGACGCATGG 173564 Query 115220 ATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC---GGCGGGAATGTCTT 115274 ||| | | |||| |||||| | ||| || || | ||| | || | |||| Sbjct 173565 GTGA--AGAGCTTGCTGGACATGAGGTTGTACGTTTCGAGGACTCGGTCGATATTGTC-G 173621 Query 115275 CCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATAC 115334 |||| | ||||| | | || ||||| | ||||| |||||| || | | | | Sbjct 173622 CCCCAT--ATACCCACGGCAACGCGCATGATCATGTGTTGGGGGCGCTCAACGATCTTGC 173679 Query 115335 CATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATAACCAAAGTCAT 115394 | |||||| || | || ||| ||||| ||||||| |||||||| | ||| | Sbjct 173680 CGTCGAGCTTCAGCAGATAAGAACGCTCCAGAGTCTTGAAGCCAAAATACTGATAGTTAA 173739 Query 115395 AGTCCC 115400 |||||| Sbjct 173740 AGTCCC 173745 >seq18 Length=371689 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 10967 GCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATA 11026 |||||||| ||||||||||| | ||||| || ||| | ||| | || | || | Sbjct 185188 GCGTCAATCTCATCGATGAAGATTATACATGGAGCATTCTTACGACCCTCTGCGAATAAG 185247 Query 11027 TCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGG--CGGCGGAAC 11084 || || ||||| | |||||||||||||||||| |||| ||| | || | | || Sbjct 185248 TCGCGTACTCTGGACGAACCGACACCCACAAACATCTCCATAAACTCGGACCCACTGACG 185307 Query 11085 ATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCG 11144 | || |||| ||| || || || || |||| ||| ||||| || || |||| Sbjct 185308 CT--GAAAAAGGCGACTCCTGACTCTCCAGCCGTGGCCTTGGCTAGGAGTGTTTTACCCG 185365 Query 11145 TCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190 | || || || ||||||| |||||||| |||||| ||||||| Sbjct 185366 TGCCCGGAGGTCCGGCGAGAATAGCACCACGCGGGATCTTGGCACC 185411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349284120240