Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq69 233 2e-56
seq18 87.8 2e-12
>seq69
Length=174959
Score = 233 bits (258), Expect = 2e-56
Identities = 965/1506 (64%), Gaps = 36/1506 (2%)
Strand=Plus/Plus
Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974
||||| ||||| || ||||| | | ||||| |||| |||||| ||||| ||||||||
Sbjct 172256 AACTCGCCCGCCAGTACGCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 172315
Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034
||||| || | |||||| | ||| ||| || ||||| || |||| || || |||||
Sbjct 172316 TTGTTGCCAAGGATTTGCGACGTGCTGGCCGTCGGCATAGGGGCCACCAGCAGACTGTTG 172375
Query 114035 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT- 114093
|| | || | ||| | || | ||| ||| | ||||| || || |||| ||
Sbjct 172376 CGTATGCCATACTCCTTGATCTGCTCCCGGAGCGTTTCCCACTCCCAG---AGCTCTGAA 172432
Query 114094 --CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAAT 114151
|| | ||| |||||||||||||||||| | || | || || |||||||| | |||
Sbjct 172433 GGCTTCACCTTCCACATATCAAACTGGAGCACGCCCTCCGACGCAGGCGATCCTTTAAAC 172492
Query 114152 GTCTCGTATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGA 114208
| | ||| || || || || |||| || ||| | | | || |||||
Sbjct 172493 GACGAGTAGGGCCCTTCGCTCTTTGCCAGCTCCATTGAGGCAGTC---AACGCGGCGTGG 172549
Query 114209 TACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGT 114268
|| || ||||| || || || | || |||||| || ||||||| |
Sbjct 172550 TAGATGGTCTCGAATATTTTCTGGTTTAGCTCCCGGGCCTCCGGAGACTCAAACGGCATG 172609
Query 114269 CGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 114328
||| | ||| |||| || || || |||||||| | ||||| || || || | |
Sbjct 172610 CGGAGAGCCAGAAAAGCATCAGCCAGGCCCTGGACACCAACACCAATCGGTCGGTGGCGC 172669
Query 114329 ATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 114388
|| || ||| | || || || || ||| || ||||| | |||||| ||
Sbjct 172670 ATGTTGCTGTTTTGGGCCTCTTCAACTGGGTAATGGTTGACGTCGATGATCCTATTGAGG 172729
Query 114389 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 114448
|| | ||| |||| || | || || ||||| | | | || | | || ||
Sbjct 172730 TTACGGACGACGACCTGCGTCACCTCGTGGAGCTTCTGGAAGTCGTAGCAGCCCTGGTCA 172789
Query 114449 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508
| | ||| | ||| ||||| | || |||||||| || |||| |||||
Sbjct 172790 TAGTCGACGAAGGCAGGCAGGGCTAGCGAGGCCAGATTGCAGACAGCAACTTCATCAGGT 172849
Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568
||| |||||| | |||||||| || | || |||||| ||||||||||| |||||||
Sbjct 172850 GCAGAGTACTCAACGATTTCCGTGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTTT 172909
Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628
||||| ||| ||| || ||||||||| |||||| | || | ||||| |||||
Sbjct 172910 TGATTGCTCTTGCGGTTGCAATGATCCTTGTACAGCATGAACGGGTTGCCCGTTTCCGTC 172969
Query 114629 TGGGACTT-GAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 114686
| | |||| || |||| | ||| | | || | || |||| || | | | || |
Sbjct 172970 T-GTACTTCCAGGATAGAATACCACAGCTTCTG-AGCCCGCACCGTCTTGCGGCCACGGC 173027
Query 114687 CCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 114746
|||| |||||||||| ||| || || ||||| || || || | || | || |
Sbjct 173028 CCTCGCGCTCGTACTTTTCGTACAGAGCCTCAAATTCATCGCCGTAGCAGTCGGCCAGAC 173087
Query 114747 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGA 114806
| || | | ||||| | ||| | ||| | ||| | ||| || ||||||||||
Sbjct 173088 CGGGACATTCGTTGGGGCACATGAGCGTCCAATCACCGTTTTTCTCCACGCGCTTCATGA 173147
Query 114807 AGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 114866
| ||||| || ||||| || ||| ||||||| || ||| ||| | || || | || |
Sbjct 173148 ACAGGTCGGGAATCCACAGGGCTAAGAAGAGGTCGCGAGCTCGAACCTCCTCCTTGCCAT 173207
Query 114867 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA-CGGTTCCAGGTACACC 114925
| || ||||| |||| ||| || | || ||| || ||||| || |||||||| |
Sbjct 173208 GGTTCTTGCGCAAATCCAGAAACTCAAAGACATCAGCATGCCATTGGCTCCAGGTATATG 173267
Query 114926 GCGA------TTGACCCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTA 114979
|| | || || ||| | | || |||||| || || | || ||| |||
Sbjct 173268 GCAAAGGCACCTGGCCGCTT--GTTG-CCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTA 173324
Query 114980 AATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGAC 115039
|| || |||||||| ||||||| ||| | || || || || || ||| | |||
Sbjct 173325 AAGACACGAAGCATGGGAATGACACCGTTCGAGGTCCCGTTGGTGCCGGCAATGCAAGAG 173384
Query 115040 TTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 115099
| || | || ||| | || | || || || || ||| ||| |||||
Sbjct 173385 CCGGTAGCACGGATCCGATGCACGTTGAGCCCGATGCCACCGGCCATCTTAGAGATCATG 173444
Query 115100 GCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGG 115159
|||||| | |||| || |||| || || ||||| |||| |||| | | | |||
Sbjct 173445 GCGCACGTCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCAACGAGG 173504
Query 115160 AAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219
||||| |||| ||| | || || ||||||||||| || | || | ||| |||
Sbjct 173505 AAGCACGAGGACAGTTGGCACTGAGGCGTGCCAGCGTTGAACAGCGCCGGCGACGCATGG 173564
Query 115220 ATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC---GGCGGGAATGTCTT 115274
||| | | |||| |||||| | ||| || || | ||| | || | ||||
Sbjct 173565 GTGA--AGAGCTTGCTGGACATGAGGTTGTACGTTTCGAGGACTCGGTCGATATTGTC-G 173621
Query 115275 CCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATAC 115334
|||| | ||||| | | || ||||| | ||||| |||||| || | | | |
Sbjct 173622 CCCCAT--ATACCCACGGCAACGCGCATGATCATGTGTTGGGGGCGCTCAACGATCTTGC 173679
Query 115335 CATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATAACCAAAGTCAT 115394
| |||||| || | || ||| ||||| ||||||| |||||||| | ||| |
Sbjct 173680 CGTCGAGCTTCAGCAGATAAGAACGCTCCAGAGTCTTGAAGCCAAAATACTGATAGTTAA 173739
Query 115395 AGTCCC 115400
||||||
Sbjct 173740 AGTCCC 173745
>seq18
Length=371689
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/226 (69%), Gaps = 4/226 (2%)
Strand=Plus/Plus
Query 10967 GCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATA 11026
|||||||| ||||||||||| | ||||| || ||| | ||| | || | || |
Sbjct 185188 GCGTCAATCTCATCGATGAAGATTATACATGGAGCATTCTTACGACCCTCTGCGAATAAG 185247
Query 11027 TCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGG--CGGCGGAAC 11084
|| || ||||| | |||||||||||||||||| |||| ||| | || | | ||
Sbjct 185248 TCGCGTACTCTGGACGAACCGACACCCACAAACATCTCCATAAACTCGGACCCACTGACG 185307
Query 11085 ATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCG 11144
| || |||| ||| || || || || |||| ||| ||||| || || ||||
Sbjct 185308 CT--GAAAAAGGCGACTCCTGACTCTCCAGCCGTGGCCTTGGCTAGGAGTGTTTTACCCG 185365
Query 11145 TCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190
| || || || ||||||| |||||||| |||||| |||||||
Sbjct 185366 TGCCCGGAGGTCCGGCGAGAATAGCACCACGCGGGATCTTGGCACC 185411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597349284120240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |