Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq12 109 6e-19 seq70 100 3e-16 seq14 87.8 2e-12 >seq12 Length=470578 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065 ||||| ||| ||| || || || |||||||| | |||||| || | || || |||||| Sbjct 224087 TGCAACGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCGGCCATCCTCAAGCTGC 224028 Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125 || ||||| || || || ||||| || || | || | | |||||||||| |||||| Sbjct 224027 TTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCCTTGTCCTGGATTTTC 223968 Query 42126 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 42185 || | | | | |||||| |||||| || || | ||||| || ||||| ||| Sbjct 223967 GACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTGATCGTCTTGCCAGTT 223908 Query 42186 AGCGTCTTTACAAAGATTTGCAT 42208 | ||||| |||||||||||||| Sbjct 223907 AATGTCTTCACAAAGATTTGCAT 223885 Score = 93.3 bits (102), Expect = 5e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||| | ||||| ||||| || || |||||||||||||| |||||| || | Sbjct 224328 ACGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATATTGTAATCGCTCAGAGTACGTCC 224269 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || || || || || || |||||||| ||||| ||||||| || | || ||||| Sbjct 224268 ATCTTCCAGTTGTTTTCCGGCAAATATGAGGCGCTGTTGGTCGGGGGGAATGCCTTCCTT 224209 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||||| || | | | | ||| || ||||| || || | || || Sbjct 224208 GTCTTGTATTTTCGACTTCACATTGTCAATCGTATCCGAAGATTCAACTTCCAAAGTAAT 224149 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || ||||| | ||||| || || |||||||| Sbjct 224148 CGTCTTTCCCGTCAAAGTCTTGACGAATATTTGCAT 224113 >seq70 Length=137430 Score = 100 bits (110), Expect = 3e-16 Identities = 150/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065 |||| ||||||||||| || || || || || ||| || || | || || |||||| Sbjct 82955 TGCAGAGTGCTCTCCTTCTGTATGTTATAGTCGCTCAGGGTTCGGCCATCTTCGAGCTGC 82896 Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125 || || || || ||||| ||||||||||||| || | || |||||||||| ||| | || Sbjct 82895 TTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCTT 82837 Query 42126 TG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 42183 | |||| ||| | | | ||||| || ||||| || | ||||| || || || | Sbjct 82836 GGACTTGA-CGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGAGTGATTGTCTTCCCTG 82778 Query 42184 TTAGCGTCTTTACAAAGATTTGCATTTT 42211 | || || || |||||||| ||||| || Sbjct 82777 TGAGGGTTTTGACAAAGATCTGCATCTT 82750 >seq14 Length=772799 Score = 87.8 bits (96), Expect = 2e-12 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 ||||||| || |||||||| | ||| || || | || || |||||||| || ||||| | Sbjct 69848 CCTTTTGGATGTTGTAATCGGACAGGGTTCGGCCATCTTCAAGCTGCTTGCCGGCGAAGA 69907 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | ||||| || || || | || | |||||| ||| ||| | || | || | || Sbjct 69908 TCAGTCGTTGTTGATCCGGAGGAATAACCTCCTTATCC-TGAATCTTGGATTTAAAGTTA 69966 Query 42139 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||| || ||| || || |||| |||||||||||||||||||| ||||| || Sbjct 69967 TCGATCGTTTCCGACGACTCGACCTCGAGGGTGATGGTTTTGCCCGTTAGGGTCTTGACG 70026 Query 42198 AA 42199 || Sbjct 70027 AA 70028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543208875287520