Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq69 235 5e-57 >seq69 Length=174959 Score = 235 bits (260), Expect = 5e-57 Identities = 959/1490 (64%), Gaps = 41/1490 (3%) Strand=Plus/Minus Query 93898 CCGACCCTGTTCAACGCGGGGA--CCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GATG 93954 ||| | ||||||||||| || | || | |||| || |||| ||||| ||||| | || Sbjct 173554 CCGGCGCTGTTCAACGCTGGCACGCCTCAGTGC--CAACTGTCCTCGTGCTTCCTCGTTG 173497 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 || | |||| ||| |||| || |||| ||||| |||||| || || | ||| Sbjct 173496 AC-ATGAAGGATGACAGCATCGAGGGCATTTACGACACGCTCAAGACGTGCGCCATGATC 173438 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || || || || |||||| ||| || || | ||||| | || || | | Sbjct 173437 TCTAAGATGGCCGGTGGCATCGGGCTCAACGTGCATCGGATCCGTGCTACCGGCTCTTGC 173378 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || ||| ||||| || ||||| ||||| || | || ||||| || ||||| |||||| Sbjct 173377 ATTGCCGGCACCAACGGGACCTCGAACGGTGTCATTCCCATGCTTCGTGTCTTTAACAAC 173318 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 |||| |||||||| |||||||| || | | || ||| | || || | || || Sbjct 173317 ACGGCCCGCTACGTCGACCAGGGCGGCAACAAGCGGCCAGGTGCCTTTGCCATATACCTG 173258 Query 94195 GAGCC-CTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| ||||| || || || | || | || |||| |||||||| ||||| || Sbjct 173257 GAGCCAATGGCATGCTGATGTCTTTGAGTTTCTGGATTTGCGCAAGAACCATGGCAAGGA 173198 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | || | |||||||||| || || ||| | || ||||| || ||||| || Sbjct 173197 GGAGGTTCGAGCTCGCGACCTCTTCTTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCG 173138 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 ||| ||||||||| | |||| || | || ||||| ||||||||||| ||| |||| Sbjct 173137 CGTGGAGAAAAACGGTGATTGGACGCTCATGTGCCCCAACGAATGTCCCGGTCTGGCCGA 173078 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCAAGGCCA 94432 | | || ||||| | |||| | |||| | ||| ||||| | | Sbjct 173077 CTGCTACGGCGATGAATTTGAGGCTCTGTACGAAAAGTACG-AGCGCGAGGGCCGTGGCC 173019 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | ||| || ||| |||||||||| || ||| |||| |||||| ||| |||| Sbjct 173018 GCAAGACGGTGCGGGCTCAGAAGCTGTGGTATTCTATCCTGGAAGTACAGACGGAAACGG 172959 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | | || | ||| ||| |||||| | |||| |||| ||| || || |||| | Sbjct 172958 GCAACCCGTTCATGCTGTACAAGGATCATTGCAACCGCAAGAGCAATCAAAAGAACCTGG 172899 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | || ||| ||||| || ||||| || || || ||||| || | || || || Sbjct 172898 GCACCATTCGGAGTTCGAACCTTTGCACGGAAATCGTTGAGTACTCTGCACCTGATGAAG 172839 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA-GATGCCTACACG 94671 ||||||| || || |||| ||| | |||| | | ||||| ||| ||| | || | Sbjct 172838 TTGCTGTCTGCAATCTGGCCTCGCTAGCCCTGCCTGCCTTCGT-CGACTATGAC--CAGG 172782 Query 94672 TCTACTGCTTCGTTC--GATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGA 94729 || || | | | | | || | ||| |||| ||| || | | ||| | Sbjct 172781 GCTGCTACGACTTCCAGAAGCTCCACGAG---GTGA----CGCAGGTCG--TCGTCCGTA 172731 Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789 |||| || ||| | |||||| ||| ||||| || ||||| | ||| ||| Sbjct 172730 ACCTCAATAGGATCATCGACGTCAACCATTACCCAGTTGAAGAGGCCCAAAACAGCAACA 172671 Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849 || || || || || || | || |||||||| | || || || | || | | Sbjct 172670 TGCGCCACCGACCGATTGGTGTTGGTGTCCAGGGCCTGGCTGATGCTTTTCTGGCTCTCC 172611 Query 94850 GTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTT 94909 | |||| | || ||| || || || | || ||| |||||||| | ||| | Sbjct 172610 GCATGCCGTTTGAGTCTCCGGAGGCCCGGGAGCTAAACCAGAAAATATTCGAGACCATCT 172551 Query 94910 ATTACGGGGCCATGAAACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCACACGAA 94968 | ||| || ||| || | | |||| ||| || | ||||| || Sbjct 172550 ACCACGCCGCGTTGACTGCCTCAATGGAGCTGGCAAAGAGCGAA----GGGCCCTACTCG 172495 Query 94969 TCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAG 95028 ||||| |||||||| | ||||| | | ||||| || | ||| |||||| Sbjct 172494 TCGTTTAAAGGATCGCCTGCGTCGGAGGGCGTGCTCCAGTTTGATATGTGGAAGGTGAAG 172435 Query 95029 CCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAA 95088 || || | || | || |||||| | || || || ||||| | || || | Sbjct 172434 CCTTCAGAGCTCTGGGAGTGGGAAACGCTCCG---GGAGCAGATCAAGGA--GTATGGCA 172380 Query 95089 AACGC-----GCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCA 95143 |||| ||||| |||||||| ||||| |||||| |||| |||| |||||||||| Sbjct 172379 TACGCAACAGTCTGCTGGTGGCCCCTATGCCGACGGCCAGCACGTCGCAAATCCTTGGCA 172320 Query 95144 ACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGG 95203 ||||||||| ||||| || | ||| |||||| | ||| | | || || || || || | Sbjct 172319 ACAACGAGTGCTTCGAGCCTTACACGTCCAACATCTACCAGCGACGCGTACTGGCGGGCG 172260 Query 95204 AATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGT 95262 | |||| || ||||| || || ||| || | || || |||| | ||| Sbjct 172259 AGTTCCAGGTGGTCAACCCCTGGCTGCTCAAGGATCTGGTCGACT-TGGGCTTATGGTCG 172201 Query 95263 GACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATA 95322 ||| | | ||||||| | | | | ||||| ||| | ||||||||||| | || Sbjct 172200 GACGCGATGAAGAACCGAATCATTGCGGAAAACGGGTCCATACAGAACATCCCCAACATC 172141 Query 95323 CCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || | ||| |||| || || ||||||||||| |||||||| ||||||| Sbjct 172140 CCCGCCGACGTCAAAGCACTTTACAAGACCGTCTGGGAGATTTCGCAGCG 172091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719625624880