Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 3e-14 >seq5 Length=598411 Score = 93.3 bits (102), Expect = 3e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 118149 CCGTAAAAGGCGATACACTCCGACAGTTTTCCGTCGCGACCGGCCCTTCCTATCTCTTGA 118208 ||||| ||| || || || ||| | |||||||| || || |||| || |||| || Sbjct 424710 CCGTAGAAGAGAATGCAGTCGGACGGCTTTCCGTCTCGGCCCGCCCGGCCCGTCTCCTGG 424651 Query 118209 TAATAACCGTCCAGTGATTTGGGCATACTGTGATGTATCACCAACCGCACGTCGGGTTTA 118268 || || || || || |||||| | | |||||| ||||| |||| |||||| || || Sbjct 424650 TAGTAGCCTTCGAGACTTTTGGGGAGGCCGTGATGCATCACGAACCTCACGTCCGGCTTG 424591 Query 118269 TCGATGCCCATCCCGAACGCTATCGT 118294 ||||||||||| ||||| || ||||| Sbjct 424590 TCGATGCCCATGCCGAAGGCGATCGT 424565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381770110649232